EBG00000313325 - n.185G>T
Drug resistance types
5 Sensitive
3 RR-TB
43 HR-TB
27 MDR-TB
3 Pre-XDR-TB
2 XDR-TB
99 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2 | 1 |
| lineage4.9 | 36 |
| lineage4.1.2.1 | 8 |
| lineage2.2.1 | 8 |
| lineage4.6.1.1 | 2 |
| 16 | |
| lineage4.1.1.3 | 4 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.9;lineage6.3 | 8 |
| lineage2.1;lineage4.9 | 9 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage6.1.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| lineage4.8 | 2 |
| lineage5.2 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3 | 2 |
| La3;lineage4.9 | 4 |
| lineage2.1 | 4 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage6.3.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.6.2.2 | 3 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La3;lineage4.8 | 1 |
| lineage3.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage1.1.2 | 1 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage3 | 3 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 182 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR6046485 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR987733 | Other | lineage4.6.1.1 | None | SRR1184381 | MDR-TB | None | SRR1172857 | Other | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR1196566 | Other | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR29050928 | Other | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR8692887 | Other | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR3675248 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR11081258 | Other | lineage4.8 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR1172817 | Other | La3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | ERR987722 | MDR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR1196768 | MDR-TB | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7496509 | Other | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR3675311 | Other | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR212001 | HR-TB | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR28119752 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR3675502 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4796577 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR7496517 | Other | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6789626 | Other | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798504 | RR-TB | lineage3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | SRR1165699 | Other | lineage4.9 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR11049020 | Other | lineage4.8 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4800341 | Other | lineage3 | None | SRR28119777 | Other | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675549 | Other | lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None |
|---|
