Rv0006 - c.1344C>T


Drug resistance types
23 Sensitive 8 RR-TB 19 HR-TB 15 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 45 Other
lineage Counts
lineage Count
La1.7;lineage4.9 10
lineage2.2.1 17
La1.7;M.canetti;lineage4.9 3
La1.7 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.9 15
La1.7;lineage4.9;lineage7 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.3.2.1 1
lineage4.8 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.2.1.1 4
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage4.9 3
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4 1
lineage4.9;lineage7 3
lineage4.6.4;lineage4.9 1
lineage1.2.1.2 1
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.1.1.1 1
M.canetti;lineage4.6.4;lineage4.9 2
La1.7;lineage4.9;lineage6 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage1 1
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage4.9 2
lineage1.1.3.1 1
lineage1.1.2 1
La1.7;lineage3.1;lineage4 1
La1.7;lineage4.3.4.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
1
spoligotype Counts
spoligotype Count
None 110
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR405209 Sensitive La1.7;lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4822635 Sensitive lineage4.1.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR3675492 Other La1.7;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR4769474 HR-TB lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183145 Other lineage2.2.1 None
SRR28351339 MDR-TB lineage4 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4820112 Sensitive lineage4.1.1.1 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4810624 MDR-TB lineage2.2 None
SAMN02585910 Other lineage2.2.1 None
ERR387051 Other lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4830353 Other La1.7 None
SRR1181251 Other lineage2.2.1 None
SRR3675446 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4819051 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR4816466 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1023509 Other lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
ERR4818110 Sensitive lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR4809184 Sensitive lineage2.2.1 za
ERR4809030 Sensitive lineage2.2.1 za
ERR4808989 Sensitive lineage2.2.1 za
ERR4808936 Sensitive lineage2.2.1 None
ERR4808953 Sensitive lineage2.2.1 None
ERR4808927 Sensitive lineage2.2.1 None
ERR8975971 Sensitive lineage2.2.1 None
SRR6045010 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR28351347 Other lineage3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR21733371 Other lineage1.1.3.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR1181328 Other lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR1034634 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR212001 HR-TB None