Rv0006 - c.1344C>T


Drug resistance types
22 Sensitive 8 RR-TB 19 HR-TB 15 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 43 Other
lineage Counts
lineage Count
lineage2.2.1 15
lineage2.1;lineage4.9 2
lineage4.8 1
La1.7;lineage3.1;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9 15
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.9;lineage7 3
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
M.canetti;lineage4.2 1
lineage4.2;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage4.6.4;lineage4.9 1
La1.7;M.canetti;lineage4.9 3
lineage1.2.1.2 1
M.canetti;lineage4.6.4;lineage4.9 2
La1.7;lineage4.9 10
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7 2
lineage4.3.2.1 1
lineage1.1.2 1
lineage4.1.2.1 1
M.canetti;lineage1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
M.canetti;lineage4.9 2
lineage4.2;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1.1 4
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7;lineage4.3.4.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4 1
1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.1.1.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage3 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage1.1.3.1 1
spoligotype Counts
spoligotype Count
None 107
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR8975971 Sensitive lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4819051 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR108471 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR1034634 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4818110 Sensitive lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR6358979 Other lineage4.9 None
ERR4809030 Sensitive lineage2.2.1 za
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4830353 Other La1.7 None
SRR1181251 Other lineage2.2.1 None
SRR3675446 RR-TB lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
ERR4822635 Sensitive lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4808936 Sensitive lineage2.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR3675222 Other La1.7 None
ERR4810624 MDR-TB lineage2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR3675492 Other La1.7;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4809184 Sensitive lineage2.2.1 za
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4808989 Sensitive lineage2.2.1 za
ERR4808953 Sensitive lineage2.2.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR212001 HR-TB None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4808927 Sensitive lineage2.2.1 None
SRR6046382 Sensitive lineage2.2.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4820112 Sensitive lineage4.1.1.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR28351347 Other lineage3 None
ERR387051 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR21733371 Other lineage1.1.3.1 None