Rv0006 - c.1344C>T
Drug resistance types
20 Sensitive
2 RR-TB
37 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 17 |
| lineage2.2.1.1 | 4 |
| lineage1.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| 32 | |
| lineage4.9 | 6 |
| lineage2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4 | 17 |
| lineage3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1;lineage1.2.2.1 | 1 |
| lineage4.3.4.1;La1.7 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180270 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR21733371 | Other | lineage1.1.3.1 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR1035162 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816466 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | SRR4033473 | HR-TB | lineage4.3.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR1035138 | MDR-TB | None | ERR1023509 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR5341315 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | ERR4820112 | Sensitive | lineage4.1.1 | None | SRR6045519 | HR-TB | None | SRR6046397 | Other | None | SRR6046824 | HR-TB | None | ERR4831128 | Sensitive | lineage4.1.2.1 | de | ERR4830353 | Other | None | ERR4822635 | Sensitive | lineage4.1.2.1 | None | SRR6046482 | HR-TB | None | ERR067681 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR133986 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR3283025 | HR-TB | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR387051 | HR-TB | None | ERR3439432 | Other | None | ERR3797015 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR4809184 | Sensitive | lineage2.2.1 | za | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4798406 | HR-TB | None | ERR4809030 | Sensitive | lineage2.2.1 | za | ERR4808989 | Sensitive | lineage2.2.1 | za | ERR403298 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR8975971 | Sensitive | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4808927 | Sensitive | lineage2.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR4808953 | Sensitive | lineage2.2.1 | None | ERR4808936 | Sensitive | lineage2.2.1 | None | ERR6358979 | Other | None | ERR736835 | HR-TB | None |
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