Rv0005 - c.124_126delTTAinsCTG
Drug resistance types
42 Sensitive
2 RR-TB
81 HR-TB
1 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| 86 | |
| lineage4 | 32 |
| lineage4.9 | 28 |
| La3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.3 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1 | 1 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.9;La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6359045 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR702404 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR702406 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | SRR1167384 | Other | lineage4 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1169306 | Other | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1174897 | HR-TB | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184294 | HR-TB | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196566 | HR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675502 | Other | None | ERR176779 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | ERR176643 | HR-TB | None | ERR212033 | HR-TB | None | ERR212001 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675550 | Other | None | ERR4816466 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR1035162 | Other | None | ERR4816656 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | ERR234659 | HR-TB | None | ERR4818615 | Other | None | ERR1023509 | Other | None | SRR5341418 | Other | None | SRR5341302 | HR-TB | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341470 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | ERR502889 | Other | None | SRR6046824 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR323038 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | ERR5311090 | HR-TB | None | ERR323043 | HR-TB | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR1034652 | Other | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR323063 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR3283021 | HR-TB | None | ERR133986 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797014 | Other | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None |
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