Rv0006 - c.1141C>T


Drug resistance types
39 Sensitive 7 RR-TB 118 HR-TB 16 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 96 Other
lineage Counts
lineage Count
126
lineage2.2.1 15
lineage4.9 26
lineage4.5 2
lineage2 4
lineage4.9;La3 1
La1.2 1
lineage6.3;lineage2.2.1 1
lineage4.9;La1 1
lineage4.1.1 2
lineage4.1 2
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.1.1.3 2
lineage4.3.4.2.1 2
lineage2.1 2
lineage3;lineage2.1 1
lineage4.1.2.1 16
lineage1.2.1.1 1
lineage4 33
lineage2.2 1
lineage4.8;La3 1
La1.8.1 4
lineage3 4
lineage4.8 1
lineage4.9;lineage2.1 1
lineage4.4.1.1 4
lineage3.1 3
lineage1.1 1
lineage4.3.3 4
lineage4.7 1
lineage4.1.2 1
lineage4.4.2 1
lineage4.1.3 2
lineage1.2.2.2 1
lineage3.1.2 1
lineage4.3.4 1
lineage1.1.3.1 1
lineage4.3.2 2
lineage1.1.2 1
lineage6.1.3 1
lineage1.2.1.2 1
lineage1.2.1.2.1 1
spoligotype Counts
spoligotype Count
None 278
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19304036 HR-TB None
SRR18003019 Other lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR8692887 Other None
SRR20969677 HR-TB lineage2 None
SRR21576679 MDR-TB lineage2.2.1 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR21576610 RR-TB lineage2.2.1 None
SRR26399973 Other lineage4.9;La3 None
ERR4815604 HR-TB None
SRR23961549 Other La1.2 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR23961542 Other lineage4.9;La1 None
ERR176793 Other lineage4.1.1 None
ERR176779 HR-TB None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR6325445 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675465 HR-TB None
ERR1035239 HR-TB None
SRR3675482 HR-TB None
ERR161033 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675501 HR-TB None
SRR3675488 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675486 HR-TB None
SRR3416776 Other lineage2.1 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675221 HR-TB None
SRR3675222 Other None
ERR4814734 Other lineage1.2.1.1 None
SRR3675236 HR-TB None
SRR3675246 Sensitive lineage4 None
ERR181824 HR-TB lineage4 None
ERR2027263 Other lineage4 None
SRR3675311 Other None
ERR176651 HR-TB None
ERR181887 HR-TB None
SRR3675383 HR-TB None
ERR212121 HR-TB None
SRR3675545 HR-TB None
ERR212001 HR-TB None
SRR3675572 Other None
ERR212125 HR-TB lineage4 None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
SRR3742665 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR3275196 Other lineage2.2.1 nl
ERR4816585 Other lineage2.2 None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR234659 HR-TB None
ERR502912 Other lineage2.2.1 None
ERR3275215 Other lineage4.1.2.1 nl
ERR4817893 Other lineage4.8;La3 None
ERR4818021 Other La1.8.1 None
ERR4818394 Other lineage4.9 None
ERR2229143 Other lineage4.1.1 None
SRR5341425 Other lineage4 None
ERR3275220 Other lineage3 nl
ERR4818615 Other None
SRR5341387 Other lineage4 None
SRR5341298 Sensitive lineage4 None
SAMN02414850 Other lineage4.1.2.1 None
ERR2514327 HR-TB lineage4.8 None
ERR4819781 Other lineage2.2.1 None
SRR5341300 Other lineage4 None
SRR5341302 HR-TB None
SRR5341299 Sensitive lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341333 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
SRR5341366 Sensitive lineage4 None
ERR2446563 Other lineage2.2.1 nl
ERR2693239 HR-TB None
SRR5535933 HR-TB None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6045519 HR-TB None
ERR2446118 Other lineage4.1.2.1 nl
ERR2693227 Other lineage4.9 None
ERR278594 HR-TB None
ERR4821655 Sensitive lineage4 None
ERR2446144 Other lineage3 nl
SRR6045892 Sensitive None
SRR6046066 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6045952 HR-TB None
SRR6046514 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6325444 HR-TB None
ERR4830353 Other None
SRR6045399 Other None
SRR6325448 HR-TB None
SRR6046540 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6511621 HR-TB None
SRR6325447 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR3077978 Other lineage1.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6831950 Other lineage4.3.3 None
ERR294248 HR-TB None
SRR6789626 Other None
ERR294266 HR-TB None
ERR323038 HR-TB None
ERR323036 HR-TB None
ERR502510 Sensitive lineage4 None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
SRR7535082 Sensitive lineage4 None
SRR7131023 Other lineage4.1.2.1 None
SRR7496523 Other lineage4.7 None
SRR9970980 Other lineage4.1.2 None
SRR7496517 Other None
ERR323041 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR1035122 Sensitive None
ERR323045 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR323066 Sensitive lineage4 None
DRR188519 Other lineage4.4.2 None
ERR323085 Sensitive lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1063896 Sensitive None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR137286 Sensitive lineage4 None
ERR3283017 HR-TB None
ERR5336148 Other None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3797016 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3468544 HR-TB None
ERR3445501 HR-TB None
ERR3445503 HR-TB None
ERR3797069 Other None
ERR3797023 HR-TB La1.8.1 None
ERR4797184 Sensitive lineage4 None
ERR4024991 Other None
ERR4188350 HR-TB None
ERR4407452 Sensitive lineage3 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR3797083 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR405209 Sensitive lineage4 None
ERR4407463 HR-TB None
ERR473332 Other lineage4 None
ERR4796254 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797201 Other lineage1.2.2.2 None
ERR4799378 Sensitive lineage4 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4797474 Other None
ERR4798099 Other None
ERR4810741 HR-TB None
ERR4800341 Other lineage3 None
ERR4811022 HR-TB None
ERR4811142 MDR-TB None
ERR4811105 HR-TB None
ERR5908228 Other lineage4.3.3 None
ERR6358837 HR-TB None
ERR5917710 Other lineage4.1.2.1 None
ERR6866639 Other None
ERR6358991 HR-TB None
ERR6866410 Sensitive None
ERR6866022 Other None
ERR736817 HR-TB lineage4.3.4 None
ERR736834 Sensitive lineage4 None
ERR736874 HR-TB None
ERR736835 HR-TB None
ERR736839 Other None
ERR736867 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR751326 Sensitive lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821163 Other lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
SRR069989 HR-TB lineage2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9119096 Other lineage4.3.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9787256 Other lineage6.1.3 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1172817 HR-TB None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1169194 Other None
SRR1172951 Other None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172857 MDR-TB None
SRR1173384 Other lineage4 None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173400 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1175049 RR-TB None
SRR1173788 Other None
SRR1184312 HR-TB lineage2.2.1 None
SRR1175074 MDR-TB None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1184381 MDR-TB None
SRR1196566 HR-TB None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR1184388 Other None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196768 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR11972367 Sensitive lineage2.2.1 None
SRR13423544 Other lineage4.5 None
SRR12006550 Other lineage1.2.1.2 None
SRR12142341 HR-TB None
SRR13837521 Sensitive lineage4.9 None
SRR13861261 Sensitive lineage4.9 None
SRR13838004 Sensitive lineage4.9 None
SRR13837766 Sensitive lineage4.9 None
SRR13861146 Sensitive lineage4.9 None
SRR13861329 Other lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861322 Other lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR13861368 RR-TB lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861611 Sensitive lineage4.9 None
SRR15368973 Other None
SRR13861663 Sensitive lineage4.9 None
SRR14801749 Sensitive None
SRR1510066 Other lineage1.2.1.2.1 None
SRR1710057 Other lineage2.1 None
SRR1640750 HR-TB None
SRR1791696 Other La1.8.1 None
SRR1791747 Other La1.8.1 None