Rv3596c - c.1035G>C
Drug resistance types
57 Sensitive
2 RR-TB
64 HR-TB
17 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage9 | 2 |
| lineage4.9 | 108 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.3.4.1 | 2 |
| La1.2.BCG | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1.1 | 2 |
| lineage1.1.1 | 2 |
| lineage3 | 5 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.8.1 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1 | 11 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.8 | 2 |
| La2;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.1.3 | 5 |
| La1;lineage2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage3.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4 | 3 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.2 | 2 |
| lineage4.6.2.2 | 3 |
| 2 | |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 188 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR473332 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR5341319 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR7236177 | Other | La1.8.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR2199988 | MDR-TB | lineage4.1.1.3 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR5341387 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR9786597 | Other | lineage4.6.2.2 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR1063896 | Sensitive | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | ERR550637 | MDR-TB | lineage4.1.1.3 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR6044780 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
|---|
