Rv3795 - p.Val554Leu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
54 Sensitive
4 RR-TB
17 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 13 |
| lineage4.9;lineage9 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.9 | 55 |
| lineage3 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.1.2.1 | 13 |
| lineage4.2;lineage4.9 | 3 |
| La1.8.1 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.8 | 1 |
| lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| 1 | |
| lineage2.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315567 | Other | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR11466538 | Sensitive | lineage4.1.2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR11466200 | Sensitive | lineage4.1.2.1 | None | ERR11465432 | Sensitive | lineage4.1.2.1 | None | ERR11466354 | Sensitive | lineage4.1.2.1 | None | SRR7236177 | Other | La1.8.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR29096710 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR11465958 | Sensitive | lineage4.1.2.1 | None | ERR11466371 | Sensitive | lineage4.1.2.1 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR11465821 | Sensitive | lineage4.1.2.1 | None | SRR1791747 | Other | La1.8.1 | None | ERR11466227 | Sensitive | lineage4.1.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR29096709 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR29096394 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR29049025 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR29231425 | Sensitive | lineage4.9 | None | ERR11465381 | Sensitive | lineage4.1.2.1 | None | ERR751326 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR29096530 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR10808730 | Other | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR11466353 | Sensitive | lineage4.1.2.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR29096882 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR11465317 | Sensitive | lineage4.1.2.1 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465716 | Sensitive | lineage4.1.2.1 | None | ERR11466126 | Sensitive | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
|---|
