Rv0668 - c.2539C>T


Drug resistance types
46 Sensitive 4 RR-TB 39 HR-TB 13 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 34 Other
lineage Counts
lineage Count
lineage4.9 76
lineage4.6.2.2 1
La1.8.1 3
lineage4.9;lineage6.1.3 1
La1.7;lineage4.9;lineage6 1
lineage4.3.3 1
1
La1.7.X-unk4;lineage4.9 1
lineage2.2.1 10
La2;lineage4.9 1
lineage2.1;lineage4.9 2
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
lineage4.3.2.1 1
lineage4.9;lineage9 1
lineage4.3.4.2.1 2
lineage4 3
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.9;lineage7 4
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.9 1
lineage2.2.1.2;lineage7 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage1.1.2 1
lineage1.2.1.1 1
lineage4.1.1.3 1
lineage4.2.1 1
lineage4.9.1 1
lineage2.2.1.1 1
lineage4.8;lineage4.9 2
M.canetti;lineage4.9;lineage9 1
lineage4.1.2 1
lineage4.3.1;lineage4.9;lineage6 1
lineage6.1.3 1
M.canetti;lineage1 1
La1;lineage4.9 1
lineage1.1.3.1 1
lineage2.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 137
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046385 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR7236177 Other La1.8.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR323066 Sensitive lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR1063896 Sensitive None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR10315466 RR-TB lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR3675280 RR-TB lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR108471 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR5341467 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR3675312 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR4819422 HR-TB lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044875 Sensitive lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR6358979 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR323115 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR1063883 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR6511621 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341453 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
ERR779852 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR6046253 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR5341387 Other lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR387051 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR502511 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR13285068 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4821655 HR-TB lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797085 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR1173777 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR28351339 MDR-TB lineage4 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None