EBG00000313339 - n.1980T>G


Drug resistance types
29 Sensitive 3 RR-TB 41 HR-TB 6 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 27 Other
lineage Counts
lineage Count
40
lineage4.8 3
lineage4.9 13
lineage3 2
lineage4.1 1
lineage3.1.3 1
lineage2.2.1 9
lineage4 18
lineage5.2 2
lineage4.7 1
lineage4.1.2 1
lineage4.4.2 1
lineage4.4.1.2 1
lineage4.1.2.1;lineage2.2.1 1
lineage4.1.1.3 1
La1 1
La1.8.1 2
lineage4.1.2.1 2
La1.2 1
lineage2.2.1.2 1
lineage2.2 4
lineage4.3.4.2 2
lineage1.1.3.1 1
lineage6.1.3 1
La1.6 1
lineage4.2.1 1
La1.7.1 1
lineage7;lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 114
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675270 HR-TB None
SRR3675488 HR-TB None
SRR3675222 Other None
ERR1949983 Sensitive lineage4.8 None
SRR3675509 Other lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2446566 Other lineage4.1 None
SRR5341453 Sensitive None
SRR5341384 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4819863 RR-TB lineage4.9 None
SRR5341456 Other None
ERR6359082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341330 HR-TB None
SRR6046210 Other lineage4 None
SRR6045519 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045217 Other lineage4 None
SRR6045191 Sensitive lineage4.9 None
SRR6045053 Other None
ERR4831620 MDR-TB lineage2.2.1 None
SRR6046299 HR-TB None
SRR6046492 Other None
ERR4831117 HR-TB None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR6046878 HR-TB lineage4 None
SRR6511621 HR-TB None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6981961 Sensitive lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR8217918 HR-TB None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive lineage4.1.2 None
DRR188519 Other lineage4.4.2 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11488822 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR1063883 Sensitive lineage4 None
ERR1023525 HR-TB lineage4 None
ERR11466044 Other lineage4.1.1.3 None
ERR3283030 HR-TB lineage4.9 None
ERR1063896 Sensitive None
ERR3273109 MDR-TB lineage4 None
ERR108471 HR-TB lineage4 None
ERR3283010 Other La1 None
ERR3283021 HR-TB None
ERR3283040 HR-TB None
ERR3797046 HR-TB None
ERR3283055 HR-TB None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3445504 HR-TB None
ERR3445503 HR-TB None
ERR4024991 Other None
ERR3797047 HR-TB lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400529 Other lineage3 None
ERR3797063 HR-TB None
ERR3797081 Sensitive lineage4 None
ERR4769452 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4797264 Sensitive None
ERR4797184 Sensitive lineage4 None
ERR4798099 Other None
ERR4797474 Other None
ERR4799025 Pre-XDR-TB None
ERR4811493 HR-TB None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799378 Sensitive lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4810624 HR-TB lineage2.2 None
ERR6866410 Sensitive None
ERR6358979 Other None
ERR6866022 Other None
ERR6866547 Sensitive lineage4 None
ERR736835 HR-TB None
ERR6866639 Other None
ERR6866807 HR-TB lineage4 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736856 HR-TB lineage4 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR10315551 Sensitive lineage2.2.1 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9787256 Other lineage6.1.3 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10993951 RR-TB La1.6 None
SRR10808805 Sensitive None
SRR10808668 Sensitive lineage2.2.1 None
SRR14782405 HR-TB None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
SRR20969731 Other lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19295647 Sensitive lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR21677886 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None