Rv3596c - c.756G>C


Drug resistance types
51 Sensitive 20 RR-TB 73 HR-TB 56 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 100 Other
lineage Counts
lineage Count
lineage2.2.1 28
La1.7.1;La1.7.X-unk4 1
lineage4.9 149
lineage4.9;lineage9 2
lineage2.2.2 4
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage5.2 2
lineage4.1.1.3 4
lineage4.3.2;lineage4.9 1
lineage4.2.1 1
La1.7.1;lineage4.9 1
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 2
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage4.8 5
lineage4 4
La1;lineage4.1.2 1
lineage4.1;lineage4.9 1
lineage4.1.1.1 2
lineage4.6.1.2 4
lineage4.3.3 3
lineage4.2;lineage4.8.1;lineage4.9 2
La3;lineage4.9 8
La3;lineage4 1
La1.7;lineage4.9 3
lineage3 10
3
lineage4.2;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7.1 1
La1.8.1 3
lineage4.1.2.1 4
lineage4.3.3;lineage4.8 3
lineage2.2.1;lineage4.9 1
lineage4.4 1
lineage3.1.2.2 1
lineage4.3.2.1 5
lineage4.9;lineage7 1
La2;lineage4.9;lineage9 1
lineage2.2.1.1 1
lineage4.4.1.2 1
lineage4.3.4.1 1
lineage4.8;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.2.BCG 1
La2;lineage2.2 1
La3;M.canetti;lineage4.9 1
lineage4.3.4.2.1 3
lineage3.1.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2;lineage4 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage1.1.2 1
lineage1;lineage4.9 1
M.canetti;lineage1 1
lineage1.2.2.2 1
La1;lineage4.9 1
La1.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2;lineage4 1
lineage4.7 1
lineage4.1.1.3.1 1
lineage3.1 1
lineage4.1.1.2 1
La1.7.X-unk4;lineage4.9 1
lineage4.1.2 1
lineage4.6.3;lineage4.9 1
lineage4.3 1
lineage6.1.3 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 310
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18002874 MDR-TB lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR7645906 Other lineage2.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR6045706 Other lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR5341453 Other lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR5341293 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR3797086 Sensitive lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR1023509 MDR-TB lineage4.9 None
SRR1180446 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR4818110 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR363479 Other lineage4.9 None
ERR369159 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR363446 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR28351444 MDR-TB lineage3 None
ERR1063896 HR-TB None
SRR28351584 HR-TB lineage2.2.1 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4808964 RR-TB lineage2.2.1 None
SRR5341373 Other lineage4.9 None
ERR363449 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR1180440 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1159378 Other lineage4.9 None
SRR18002974 Other lineage2.2.1 None
ERR3797065 RR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR9896144 Other lineage3 None
SRR1238559 Other lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR1180226 HR-TB lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR067712 Sensitive lineage4.9 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR373946 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816470 HR-TB lineage3 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR867540 MDR-TB lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR3797062 RR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR2432997 Other lineage4.8 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6044835 Other lineage4.9 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR212125 HR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6865513 Other lineage4.1.2.1 None
ERR736834 HR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR6046485 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR6045503 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR4798262 HR-TB La1.2.BCG None
SRR20632814 Sensitive lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR363421 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675265 Other lineage4 None
SRR3675292 Sensitive lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR1172310 MDR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR12708415 HR-TB lineage2.2.1 None
SRR16156817 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6865502 Sensitive lineage4 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR124636 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR349264 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR363498 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4769436 Other La1.3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3283014 Other La3;lineage4.9 None
ERR363490 Other lineage4.9 None
ERR3468488 Other La1.8.1 None
SRR6044875 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR21677886 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR5341455 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR369156 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR9971122 MDR-TB lineage4.8 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR363500 Other lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4817915 Other lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR12708419 Other lineage4.3.3 None
SRR5341299 HR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR5341469 HR-TB lineage4.9 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR4817069 RR-TB None
SRR28351442 HR-TB lineage3.1 None
SRR6045795 Other lineage2.2.1 None
SRR22424765 HR-TB lineage4.8 None
ERR6358979 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
SRR6044952 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR373945 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR369157 Sensitive lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4798504 RR-TB lineage3 None
ERR4815556 RR-TB lineage3 None
DRR184629 Other lineage2.2.1 None
ERR363474 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR7535082 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
ERR3275941 RR-TB lineage4.3 nl
SRR6045555 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR9119669 MDR-TB lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4816762 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4818561 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR323066 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None