Rv0668 - c.552G>C


Drug resistance types
91 Sensitive 1 RR-TB 34 HR-TB 8 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 36 Other
lineage Counts
lineage Count
lineage1.1.2 2
lineage4.9 114
lineage4.8 2
lineage4.1.1.2 1
lineage2.2.2 1
lineage4.3.4.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage2.2.1 10
La1.7;lineage4.9 3
La1.7;lineage4.9;lineage7 1
lineage4.8;lineage4.9 2
lineage2.2.1.1 1
lineage3 2
lineage4 2
La1.8.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.4.2 1
La1.7.1 1
La1.7;lineage3.1;lineage4 1
lineage4.9;lineage9 1
La1;lineage4.9 2
lineage1.1.3.1 1
lineage4.3.4.1 2
lineage2.2.1;lineage4.1.2.1 1
lineage4.6.2.2 1
lineage4.1;lineage4.9 1
1
lineage4.1.1.3 1
lineage4.1.2 1
lineage1.2.1.1 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
lineage4.3.2.1 1
La1.2.BCG;lineage4.9 1
La1.2.BCG 1
La1.6;lineage4 1
La3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 175
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341310 Other lineage1.1.2 None
SRR29096935 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR373945 Sensitive lineage4.9 None
SRR29097058 Other lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR4769474 HR-TB lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR926154 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR29096246 Sensitive La1.7;lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341299 HR-TB lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR363456 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR28351339 MDR-TB lineage4 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR363453 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR369158 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786592 Other lineage4.3.4.2 None
ERR4188247 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR5341455 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR13264981 Sensitive La1.7;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR349265 Other lineage4.9 None
SRR5341366 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4797184 Sensitive lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR12708392 Other lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR29231425 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR4799378 Sensitive lineage4.9 None
SRR29096873 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR363502 Other lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR21677886 Sensitive lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR779852 Sensitive lineage4.9 None
ERR323085 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
ERR369162 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR28351347 Other lineage3 None
ERR369163 Sensitive lineage4.9 None
ERR1063896 Sensitive None
SRR1159378 Other lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR6866410 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4798099 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675235 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR29050859 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4819933 Sensitive lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 Sensitive lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
ERR3797046 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR6359070 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR926155 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR29055611 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR323066 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR3797029 Other lineage4.9 None
ERR502511 Sensitive lineage4.9 None