lineage | Count |
---|---|
lineage4.9 | 8 |
19 | |
lineage2.2.1 | 18 |
lineage2.2.1.1 | 1 |
lineage4.1 | 1 |
lineage4 | 48 |
lineage4.1.2 | 2 |
lineage4.3.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.7 | 1 |
lineage4.8 | 4 |
lineage3 | 6 |
lineage1.1.2 | 2 |
lineage3.1.2.1 | 2 |
lineage1.1.3.1 | 1 |
lineage6.1.3 | 1 |
lineage4.6.2.2 | 3 |
lineage3.1.3 | 2 |
La1.8.1 | 1 |
lineage4.2.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage1.2.1.1 | 1 |
lineage2.1 | 1 |
lineage4;lineage2 | 1 |
lineage4.1.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.1.1 | 2 |
lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 132 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046250 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR4828420 | Sensitive | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR067712 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4596902 | HR-TB | lineage3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4796577 | MDR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798823 | HR-TB | lineage4 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6866410 | Sensitive | None | ERR736856 | HR-TB | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR9634265 | Sensitive | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR14801749 | Sensitive | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR4817069 | RR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4818086 | Sensitive | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818718 | Other | lineage4.8 | gb | ERR2513259 | Other | lineage3 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341396 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341453 | Sensitive | None | ERR4817554 | Other | lineage1.1.1 | None | ERR2512912 | Sensitive | lineage4.6.2.2 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341300 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6045892 | Sensitive | None |
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