lineage | Count |
---|---|
lineage4.9;lineage6.3 | 1 |
lineage4.9 | 21 |
La3;lineage4.9 | 8 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
La1.2 | 1 |
lineage2.2.1 | 4 |
1 | |
La1.8.1 | 3 |
lineage4.1.2 | 1 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
M.canetti;lineage2.2 | 2 |
La3;lineage4 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR5341453 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR9786843 | Other | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR7236177 | Other | La1.8.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR736848 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4812159 | Sensitive | lineage4.1.2.1 | pe | ERR4188247 | HR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None |
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