Rv0006 - c.1974G>A
Drug resistance types
41 Sensitive
4 RR-TB
114 HR-TB
9 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 52 |
| 97 | |
| lineage4.9 | 43 |
| lineage4.8 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1 | 6 |
| lineage3 | 1 |
| lineage4.1.2.1 | 8 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.1 | 1 |
| La1.8.1 | 3 |
| La1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675383 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR212001 | HR-TB | None | ERR4817347 | HR-TB | lineage4 | None | SRR3675545 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR5341387 | Other | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341303 | RR-TB | lineage4 | None | ERR2693231 | Other | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR4821053 | Other | lineage3 | None | SRR5341469 | Other | lineage4 | None | ERR2693239 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR2693230 | Other | None | SRR6046141 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046362 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6511621 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR4831117 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR5311081 | HR-TB | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283017 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283041 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797044 | Other | None | ERR3797086 | Other | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797064 | Sensitive | None | ERR3797083 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797082 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR3797087 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4797264 | Sensitive | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4811493 | HR-TB | None | ERR4797474 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358979 | Other | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736848 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119669 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | SRR10809074 | Sensitive | lineage4 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR10808805 | Sensitive | None | SRR1158918 | Sensitive | lineage4 | None | SRR13861532 | Other | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR8692893 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1640750 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675482 | HR-TB | None | SRR8692898 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692791 | Other | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR8692897 | Other | lineage4.9 | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675234 | Other | None |
|---|
