Rv1630 - c.882G>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
65 Sensitive
8 RR-TB
47 HR-TB
13 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 102 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1 | 2 |
| La1.8.1 | 4 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1 | 20 |
| lineage2.2.2 | 2 |
| 2 | |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La2;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.3 | 1 |
| lineage1.1.2 | 2 |
| lineage6.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage3 | 6 |
| lineage2.2.1.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1 | 1 |
| lineage4 | 2 |
| lineage4.1.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1;lineage4.9 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage3.1.2.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| lineage4.8 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 201 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818536 | Other | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR7236177 | Other | La1.8.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4821143 | Other | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR29096399 | Sensitive | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR29097066 | Sensitive | lineage4.9 | None | SRR29096179 | Sensitive | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR29096150 | Other | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR29097054 | Sensitive | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR6358979 | Other | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | SRR17832802 | HR-TB | lineage3 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR3675246 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR6044835 | Other | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR4816470 | HR-TB | lineage3 | None | SRR16157123 | Other | lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4821276 | Sensitive | lineage3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR5341453 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None |
|---|
