Rv1630 - c.882G>T


Drug resistance types
20 Sensitive 12 RR-TB 71 HR-TB 19 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 52 Other
lineage Counts
lineage Count
lineage4.9 87
lineage4.1.1.3 2
La2;lineage4.9 1
lineage4.3.2.1 3
lineage1.1.2 2
lineage2.2.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1;lineage4.9 2
La1;lineage4.1.2 1
lineage2.2.1 15
lineage4.6.2.2 2
lineage4.9.1 2
lineage2.2.1;lineage4.9 1
lineage4.8;lineage4.9 2
2
lineage4.1.2.1 2
lineage4.3.4 1
lineage4.3.4.2.1 2
lineage4.4.1.1.1 1
lineage4.1.2 1
lineage4.3.3 1
La1.8.1 4
lineage1.2.1.1 1
La1;lineage2;lineage4.9 1
lineage3 7
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9;lineage9 2
lineage5.1.1 1
lineage4 2
lineage4.3.2;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.2;lineage4.9 1
lineage4.4.2 1
lineage1.1.3.1 1
La1.7;lineage4.9;lineage6 1
lineage4.8 1
lineage3.1.3 1
La1.7.1 1
lineage4.6.3;lineage4.9 1
lineage2.2;lineage4.9 1
lineage6.1.3 1
lineage3.1.2.2 1
lineage2.2.2 2
lineage1.2.2.2 1
lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
La2;lineage4.9;lineage9 1
lineage2.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9;lineage7 1
lineage1.1.1.1 1
lineage6.1.1 2
lineage4.3.4.2 1
lineage2.2.1.2 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 181
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341387 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4817731 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR1184329 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341425 Other lineage4.9 None
ERR11465189 RR-TB lineage4.9.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR1063896 HR-TB None
ERR137286 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR779852 HR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR176675 Sensitive lineage4.3.4.2.1 None
SRR6045010 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR2693252 HR-TB lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1791747 Other La1.8.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1172310 MDR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR7240476 Other La1.8.1 None
SRR1183965 Sensitive lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR751345 Other lineage5.1.1 None
SRR9971270 RR-TB lineage2.2.1 None
ERR3273109 HR-TB lineage4 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR9971112 HR-TB lineage2.2.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR11466062 Sensitive lineage4.9.1 None
SRR5341455 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR1196478 Other lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
DRR188519 Other lineage4.4.2 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR987722 MDR-TB None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
ERR4797474 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4821143 Other lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
SRR6046492 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR4798504 RR-TB lineage3 None
ERR4820773 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR2513259 Other lineage3 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR1180226 HR-TB lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR1063883 HR-TB lineage4.9 None
SRR6981999 Sensitive lineage2.2.1 None
SRR5341310 Other lineage1.1.2 None
SRR26399490 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6511621 HR-TB lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1183111 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
SRR7236330 Other La1.8.1 None
SRR3675246 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR4821276 Sensitive lineage3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1158918 Other lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR6044835 Other lineage4.9 None
ERR7821163 Other lineage2.2.1 None
ERR4817915 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341299 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
ERR4769497 Other La1;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4798099 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
SRR5535933 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR6866639 HR-TB lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR6866410 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR3675312 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR17832802 HR-TB lineage3 None
SRR6045002 RR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3799304 RR-TB lineage6.1.1 None
ERR323066 HR-TB lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
SRR1180996 Other lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None