lineage | Count |
---|---|
lineage4.9 | 76 |
lineage4.6.2.2 | 2 |
lineage4.4.1.1.1 | 1 |
lineage4.3.3 | 2 |
lineage4.8 | 2 |
lineage2;lineage4.9 | 1 |
lineage4.1.2 | 1 |
La1.8.1 | 2 |
lineage4.2.2.2 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage2.2.1 | 7 |
lineage3 | 2 |
lineage4 | 2 |
lineage4.3.3;lineage4.9 | 1 |
lineage1.1.1.1 | 1 |
lineage4.8;lineage4.9 | 2 |
lineage2.2.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.1.1.3 | 3 |
lineage1.1.2 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.1;lineage4.9 | 2 |
lineage4.8.1 | 1 |
lineage4.3.4.2;lineage4.7 | 1 |
lineage4.9.1 | 1 |
1 | |
lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
lineage6.1.3 | 1 |
lineage4.3.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.2;lineage4.6.3;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 125 |
ID | Drug resistance | Lineage | Country iso2 | SRR1158918 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR9786597 | Other | lineage4.6.2.2 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4814878 | Sensitive | lineage4.8 | None | SRR1159378 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR25827391 | Sensitive | lineage3 | None | ERR4798099 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR5341387 | Other | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | SAMN02053778 | MDR-TB | lineage4.1.1.3 | za | ERR4816322 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR833139 | MDR-TB | lineage4.1.1.3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR6197021 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR833065 | MDR-TB | lineage4.1.1.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1063896 | Sensitive | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR751326 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341467 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR1180410 | Sensitive | lineage4.9 | None | DRR188598 | Sensitive | lineage3 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None |
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