Rv0676c - c.2664T>C


Drug resistance types
64 Sensitive 2 RR-TB 103 HR-TB 11 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 41 Other
lineage Counts
lineage Count
lineage2.2.1 23
lineage2.2 3
lineage4.4.1.1 2
101
lineage4.1 1
lineage4 55
lineage4.3 1
lineage4.8 11
lineage4.1.1.2 1
lineage4.9 9
lineage4.6.2.2 2
lineage2.1 1
lineage2.2.1.1 1
lineage4.1.2 2
lineage4.3.2.1 1
La1.8.1 2
lineage1.1.2 1
La1.2 1
lineage3.1.2 1
lineage1.1.3.1 1
lineage3.1 1
lineage3 1
lineage4.5 1
lineage4.2.2.2;lineage3.1.1 1
spoligotype Counts
spoligotype Count
None 224
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20995191 Sensitive lineage4.4.1.1 None
SRR20970016 Other lineage2.2 None
SRR3675465 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675222 Other None
SRR3675486 HR-TB None
SRR3675234 Other None
ERR4812808 HR-TB lineage2.2.1 None
SRR3675246 Sensitive lineage4 None
ERR4813310 HR-TB lineage2.2.1 pe
ERR4813045 HR-TB lineage2.2.1 pe
ERR4813080 HR-TB lineage2.2.1 pe
ERR176568 Other lineage4.3 None
ERR4813631 HR-TB lineage2.2.1 None
SRR3675311 Other None
ERR4813428 HR-TB lineage2.2.1 pe
ERR4813593 HR-TB lineage2.2.1 None
ERR4813690 HR-TB lineage2.2.1 None
ERR176751 HR-TB None
ERR4813665 HR-TB lineage2.2.1 None
ERR4813652 HR-TB lineage2.2.1 None
ERR4813669 HR-TB lineage2.2.1 None
SRR3675545 HR-TB None
ERR2229103 Sensitive lineage4.8 None
ERR2229578 Sensitive lineage4 None
SRR3675558 HR-TB None
ERR2229289 Sensitive lineage4.8 None
ERR2229176 Sensitive lineage4 None
ERR212121 HR-TB None
ERR2229293 Sensitive lineage4.8 None
ERR2229367 Sensitive lineage4.8 dk
ERR2229765 Sensitive lineage4.8 dk
ERR2229341 Sensitive lineage4.8 dk
ERR2229442 HR-TB lineage4.8 None
ERR2229356 Sensitive lineage4.8 dk
ERR234659 HR-TB None
ERR2229479 Sensitive lineage4.8 None
ERR2229485 Sensitive lineage4.8 None
SRR5341387 Other lineage4 None
ERR4818252 Other lineage4.1.1.2 None
SRR5341455 Sensitive lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341315 Sensitive None
SRR5341330 HR-TB None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341313 HR-TB None
SRR5341333 HR-TB None
SRR5341467 Other lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR2693231 Other None
SRR5341469 Other lineage4 None
ERR2693230 Other None
ERR2693239 HR-TB None
SRR6045555 HR-TB None
SRR6046210 Other lineage4 None
ERR2693254 Other None
ERR2693257 Other None
SRR6045519 HR-TB None
ERR278594 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6046133 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6044875 HR-TB lineage4.9 None
SRR6045053 Other None
SRR6045952 HR-TB None
SRR6045320 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6046259 Sensitive lineage4.9 None
SRR6325442 HR-TB None
SRR6325447 HR-TB None
SRR6325444 HR-TB None
SRR6046492 Other None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6046644 HR-TB None
ERR4831117 HR-TB None
SRR6511621 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR5311090 HR-TB None
ERR502510 Sensitive lineage4 None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
SRR7535082 Sensitive lineage4 None
SRR9970980 Other lineage4.1.2 None
SRR9970978 Sensitive lineage4.1.2 None
ERR323043 HR-TB None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323085 Sensitive lineage4 None
ERR323066 Sensitive lineage4 None
ERR323107 Other lineage4 None
ERR067699 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1063858 HR-TB None
ERR1063857 HR-TB None
ERR1063862 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR108471 HR-TB lineage4 None
ERR323115 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283028 Other None
ERR3283025 HR-TB None
ERR3283017 HR-TB None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283024 Other None
ERR3283031 HR-TB None
ERR3283027 HR-TB None
ERR3283032 HR-TB None
ERR3283047 HR-TB None
ERR3283040 HR-TB None
ERR3468544 HR-TB None
ERR3283055 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3797047 HR-TB lineage4 None
ERR3797016 HR-TB None
ERR3797014 Other None
ERR3797046 HR-TB None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3797036 HR-TB None
ERR3797061 Other None
ERR3797044 Other None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797073 HR-TB La1.8.1 None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR3797083 HR-TB None
ERR3797081 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4024991 Other None
ERR4188247 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4769521 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR473332 Other lineage4 None
ERR4769474 HR-TB lineage4 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798099 Other None
ERR4810741 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4799378 Sensitive lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811105 HR-TB None
ERR4811022 HR-TB None
ERR4811142 MDR-TB None
ERR6358991 HR-TB None
ERR4811493 HR-TB None
ERR6358837 HR-TB None
ERR6358979 Other None
ERR6866022 Other None
ERR6866807 HR-TB lineage4 None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736834 Sensitive lineage4 None
ERR9119669 HR-TB None
ERR736839 Other None
ERR736867 HR-TB None
ERR736872 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736875 HR-TB lineage4 None
ERR751326 Sensitive lineage4 None
ERR8976043 HR-TB None
SRR10272572 Sensitive lineage4.4.1.1 None
ERR9634265 Sensitive None
SRR10808668 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR1183965 Sensitive lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR10809074 Sensitive lineage4 None
SRR1158918 Sensitive lineage4 None
SRR1196474 HR-TB lineage3.1 None
SRR12199384 Sensitive lineage2.2.1 None
SRR1196546 HR-TB None
SRR12416824 HR-TB None
SRR14782405 HR-TB None
SRR14088376 MDR-TB lineage3 None
SRR18500602 Sensitive lineage4.5 None
SRR14801749 Sensitive None
SRR1791747 Other La1.8.1 None
SRR19417260 Sensitive lineage4.2.2.2;lineage3.1.1 None
SRR19295647 Sensitive lineage4.9 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None