Rv0676c - c.2664T>C
Drug resistance types
64 Sensitive
2 RR-TB
103 HR-TB
11 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 23 |
| lineage2.2 | 3 |
| lineage4.4.1.1 | 2 |
| 101 | |
| lineage4.1 | 1 |
| lineage4 | 55 |
| lineage4.3 | 1 |
| lineage4.8 | 11 |
| lineage4.1.1.2 | 1 |
| lineage4.9 | 9 |
| lineage4.6.2.2 | 2 |
| lineage2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 2 |
| lineage1.1.2 | 1 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1 | 1 |
| lineage3 | 1 |
| lineage4.5 | 1 |
| lineage4.2.2.2;lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 224 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20995191 | Sensitive | lineage4.4.1.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675465 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675222 | Other | None | SRR3675486 | HR-TB | None | SRR3675234 | Other | None | ERR4812808 | HR-TB | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4813310 | HR-TB | lineage2.2.1 | pe | ERR4813045 | HR-TB | lineage2.2.1 | pe | ERR4813080 | HR-TB | lineage2.2.1 | pe | ERR176568 | Other | lineage4.3 | None | ERR4813631 | HR-TB | lineage2.2.1 | None | SRR3675311 | Other | None | ERR4813428 | HR-TB | lineage2.2.1 | pe | ERR4813593 | HR-TB | lineage2.2.1 | None | ERR4813690 | HR-TB | lineage2.2.1 | None | ERR176751 | HR-TB | None | ERR4813665 | HR-TB | lineage2.2.1 | None | ERR4813652 | HR-TB | lineage2.2.1 | None | ERR4813669 | HR-TB | lineage2.2.1 | None | SRR3675545 | HR-TB | None | ERR2229103 | Sensitive | lineage4.8 | None | ERR2229578 | Sensitive | lineage4 | None | SRR3675558 | HR-TB | None | ERR2229289 | Sensitive | lineage4.8 | None | ERR2229176 | Sensitive | lineage4 | None | ERR212121 | HR-TB | None | ERR2229293 | Sensitive | lineage4.8 | None | ERR2229367 | Sensitive | lineage4.8 | dk | ERR2229765 | Sensitive | lineage4.8 | dk | ERR2229341 | Sensitive | lineage4.8 | dk | ERR2229442 | HR-TB | lineage4.8 | None | ERR2229356 | Sensitive | lineage4.8 | dk | ERR234659 | HR-TB | None | ERR2229479 | Sensitive | lineage4.8 | None | ERR2229485 | Sensitive | lineage4.8 | None | SRR5341387 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341315 | Sensitive | None | SRR5341330 | HR-TB | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | SRR5341469 | Other | lineage4 | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046210 | Other | lineage4 | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045952 | HR-TB | None | SRR6045320 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR5311090 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323043 | HR-TB | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063858 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283031 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797046 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4810741 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | SRR10272572 | Sensitive | lineage4.4.1.1 | None | ERR9634265 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR12199384 | Sensitive | lineage2.2.1 | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14782405 | HR-TB | None | SRR14088376 | MDR-TB | lineage3 | None | SRR18500602 | Sensitive | lineage4.5 | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR19417260 | Sensitive | lineage4.2.2.2;lineage3.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None |
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