Rv3596c - c.1980C>G


Drug resistance types
41 Sensitive 1 RR-TB 23 HR-TB 4 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 30 Other
lineage Counts
lineage Count
lineage4.9 59
lineage3.1.3 1
La1.2.BCG 1
La1.7;lineage4.9 3
lineage4 2
La1.8.1 2
La1.7;lineage4.9;lineage6 1
lineage2.2.1 8
lineage6.1.3 1
lineage4.3.2.1 1
lineage4.3.4.2.1 2
lineage1.1.3.1 1
lineage4.8;lineage4.9 2
La1.7 1
1
lineage4.1.2 1
lineage4.6.3;lineage4.9 1
lineage1.2.1.1 1
lineage3 1
La1;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.8 1
La1;lineage4.1.2 1
lineage2.2.1;lineage4 1
La1.7;M.canetti;lineage4.9 2
lineage4.3.3 1
lineage4.3.4.1 1
lineage4.1.1.3 1
lineage3.1 1
spoligotype Counts
spoligotype Count
None 101
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4797264 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR1915487 Other La1.2.BCG None
SRR5341469 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR926156 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3797029 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
ERR702405 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR9787256 Other lineage6.1.3 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR926154 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR29055944 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR3675222 Other La1.7 None
SRR28351584 HR-TB lineage2.2.1 None
SRR10808668 Sensitive lineage2.2.1 None
ERR1063896 Sensitive None
SRR3675501 Other La1.7;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR926160 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
ERR4819933 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR926164 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR779852 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR28351342 HR-TB lineage2.2.1;lineage4 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4188247 HR-TB lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
SRR5341461 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR3273109 HR-TB lineage4 None
ERR4799378 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR6045892 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None