Rv3457c - c.462T>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
28 Sensitive
3 RR-TB
27 HR-TB
13 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 4 |
| lineage4.9 | 45 |
| La3;lineage4.9 | 2 |
| 3 | |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.9;lineage7 | 4 |
| lineage4.6.2.2 | 4 |
| lineage3 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4 | 3 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3.1.2.1 | 1 |
| La1.7.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.8 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1 | 8 |
| La1.7;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage6.1.1 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage6.1.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.7 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7236177 | Other | La1.8.1 | None | SRR29096410 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4798823 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR4798099 | Other | lineage4.9 | None | ERR13278785 | MDR-TB | lineage4.6.2.2 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7240033 | Other | La1.8.1 | None | ERR176740 | Other | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR29097037 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR751326 | Other | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR161037 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | SRR11462861 | Other | La1.8.1 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR29097026 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
|---|
