EBG00000313339 - n.1969delTinsCC
Drug resistance types
1 Sensitive
2 RR-TB
22 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| lineage3.1.3 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage2.2.1 | 3 |
| lineage2.1;lineage4.9 | 1 |
| La1.8.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage2.2 | 2 |
| lineage4.4.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| La1;lineage4.1.2 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6358979 | HR-TB | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR10808668 | Other | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR3675582 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR16156817 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR1063896 | HR-TB | None |
|---|
