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SRA data
EBG00000313339
- n.638_649delCTCTCCGGAGGA
Drug resistance types
17 Sensitive
1 RR-TB
4 HR-TB
1 MDR-TB
3 Pre-XDR-TB
2 XDR-TB
18 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
12
La3;lineage4.9
6
lineage4.8
4
lineage4.3.4.2.1
3
M.canetti;lineage2.2
2
lineage4.8;lineage4.9
2
La1.8.1
2
lineage5.2
2
lineage2.2.1
2
lineage4
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
46
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11465509
Sensitive
lineage4.3.4.2.1
None
ERR11465510
Sensitive
lineage4.3.4.2.1
None
ERR11465511
Other
lineage4.3.4.2.1
None
ERR12015084
Other
lineage4.8
None
ERR12015085
Other
lineage4.8
None
ERR12015086
RR-TB
lineage4.8
None
ERR3273109
HR-TB
lineage4
None
ERR3283011
Other
La3;lineage4.9
None
ERR3283014
Sensitive
La3;lineage4.9
None
ERR3283028
Other
La3;lineage4
None
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