EBG00000313339 - n.1059_1063delAAAGCinsCCAAGAGT
Drug resistance types
25 Sensitive
0 RR-TB
11 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 39 |
| La1.8.1 | 2 |
| lineage4.3.3 | 1 |
| lineage2.2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4 | 1 |
| lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341387 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1159378 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1173777 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR5341425 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR9787362 | Sensitive | lineage6 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None |
|---|
