Rv0006 - c.489G>C
Drug resistance types
45 Sensitive
2 RR-TB
43 HR-TB
16 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 2 |
| 61 | |
| lineage4.9 | 12 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 2 |
| lineage4 | 42 |
| lineage4.1.1.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1 | 10 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 1 |
| lineage2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage3.1 | 2 |
| lineage4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 155 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817735 | Other | lineage4.8 | None | SRR3675574 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR2027263 | Other | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | ERR4818394 | Other | lineage4.9 | None | SRR5341456 | Other | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341302 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR6511621 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6045526 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046299 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6044790 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6789626 | Other | None | ERR323085 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR1063862 | HR-TB | None | ERR1035122 | Sensitive | None | ERR3445504 | HR-TB | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR4188247 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR4797264 | Sensitive | None | ERR4407463 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4811105 | HR-TB | None | ERR4797474 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811022 | HR-TB | None | ERR4798099 | Other | None | ERR4810741 | HR-TB | None | ERR6866639 | Other | None | ERR4811142 | MDR-TB | None | ERR6866410 | Sensitive | None | ERR6866022 | Other | None | ERR9634265 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1169194 | Other | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172234 | Other | None | SRR1173363 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175090 | Other | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1196494 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196546 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR25827453 | MDR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR15368973 | Other | None | SRR1791747 | Other | La1.8.1 | None | SRR19304036 | HR-TB | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None |
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