Rv0006 - c.1992G>C
Drug resistance types
15 Sensitive
1 RR-TB
10 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 1 |
| 7 | |
| lineage4.9 | 21 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.9 | 7 |
| lineage4.1.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;lineage4.9 | 7 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 3 |
| La1.8.1 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.3 | 2 |
| lineage4.6.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage1.1.3.2 | 1 |
| lineage3 | 1 |
| lineage2.2.1 | 6 |
| lineage6.3.1 | 1 |
| lineage6.1.3 | 2 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 81 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | Other | None | SRR3675441 | Other | lineage4.9 | None | SRR3675549 | Other | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7496509 | Other | None | ERR176751 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR18213713 | HR-TB | None | ERR4815604 | Other | None | SRR3675214 | Other | lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR4816999 | Other | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4798099 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR12416842 | HR-TB | lineage4.9 | None |
|---|
