Rv0006 - c.1992G>C
Drug resistance types
29 Sensitive
1 RR-TB
33 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 8 |
| 40 | |
| lineage4 | 31 |
| lineage2.2.1 | 6 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 1 |
| La1 | 1 |
| lineage4.1.3 | 2 |
| lineage3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage6.1.3 | 2 |
| lineage6.3.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046210 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR1063896 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323085 | Sensitive | lineage4 | None | SRR7496509 | Other | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR3283014 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283027 | HR-TB | None | ERR3283028 | Other | None | ERR3797069 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4796254 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4024991 | Other | None | ERR5336148 | Other | None | ERR4797474 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR736831 | HR-TB | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR9117805 | Other | lineage4.3.2 | None | ERR736867 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR19303884 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675465 | HR-TB | None | SRR3675311 | Other | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR212001 | HR-TB | None | ERR4816999 | Other | None | ERR176751 | HR-TB | None | SRR3675572 | Other | None | SRR3675571 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816585 | Other | lineage2.2 | None | SRR7496472 | Other | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR4819280 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None |
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