Rv0006 - c.1992G>C


Drug resistance types
13 Sensitive 1 RR-TB 13 HR-TB 6 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 46 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9;lineage6.3 4
lineage4.9 20
La3;lineage4.9 7
lineage4.1.3 2
lineage1.1.3.1 1
lineage2.1;lineage6.3 2
7
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.2.1 5
lineage2.1;lineage4.9 7
La1.8.1 1
lineage4.9;lineage6.3 3
lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage6.3.1 1
lineage1.1.3.2 1
lineage4.1.2 1
lineage6.1.3 2
lineage4.1.1.3 2
lineage3 1
lineage4.3.2.1 1
lineage4.1.2.1 1
lineage4.3.2 1
lineage4.4.1.1 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4.3.3 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 79
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3797064 Other La3;lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675441 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR7496509 Other None
ERR176751 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR3675236 Other None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR12416842 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675246 Other lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR7496472 Other lineage4.9 None
ERR212001 HR-TB None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR18213713 HR-TB None
ERR9787139 Other lineage6.3.1 None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR3797069 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR3797048 Other La3;lineage4.9 None
ERR4815604 Other None
ERR9787256 Other lineage6.1.3 None
ERR4816999 Other None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4797588 MDR-TB lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR9117805 Other lineage4.3.2 None
ERR9117709 Other None
SRR3675549 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR3797070 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3675214 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None