Rv0006 - c.2016G>T
Drug resistance types
1 Sensitive
0 RR-TB
5 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 12 |
| lineage4.1.2.1 | 1 |
| lineage4.3.2 | 1 |
| 7 | |
| lineage2.2.1 | 3 |
| lineage2.1;lineage4.9 | 6 |
| lineage4.9;lineage6.3 | 2 |
| La1.8.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2 | 1 |
| lineage3 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR29050859 | Other | lineage4.9 | None |
| ERR4820854 | Other | lineage4.1.2.1 | None |
| ERR9117805 | Other | lineage4.3.2 | None |
| ERR9117709 | Other | None | |
| SRR7496509 | Other | None | |
| ERR3797070 | Other | lineage4.9 | None |
| ERR4819781 | Other | lineage2.2.1 | None |
| SRR6045380 | Other | lineage2.1;lineage4.9 | None |
| SRR3675465 | Other | lineage4.9;lineage6.3 | None |
| SRR6045242 | Other | lineage2.1;lineage4.9 | None |
| SRR7236177 | Other | La1.8.1 | None |
| ERR3283036 | Other | lineage2.1;lineage4.9 | None |
| ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4818021 | Other | La1.2.BCG;La1.8.1 | None |
| SRR6046540 | Other | lineage2.1;lineage4.9 | None |
| SRR3675275 | Other | lineage4.9 | None |
| ERR9787139 | Other | lineage6.3.1 | None |
| SRR3675214 | Other | lineage4.9 | None |
| ERR4817896 | HR-TB | lineage2.2.1 | None |
| SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4816585 | Other | lineage2.2 | None |
| ERR4815604 | Other | None | |
| SRR3675236 | Other | None | |
| ERR3804169 | HR-TB | lineage4.1.3 | None |
| ERR5336148 | Other | lineage2.1;lineage6.3 | None |
| ERR4024991 | Other | lineage4.8;lineage4.9 | None |
| ERR4797264 | Sensitive | lineage4.9 | None |
| ERR6866022 | Other | lineage4.8;lineage4.9 | None |
| ERR6358755 | Other | lineage4.6.1.1 | None |
| SRR18213713 | HR-TB | None | |
| SRR19303884 | Other | lineage2.1;lineage6.3 | None |
| ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None |
| SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR6046066 | Other | lineage4.9 | None |
| ERR4816999 | Other | None | |
| ERR4797588 | MDR-TB | lineage3 | None |
| ERR1063846 | HR-TB | lineage4.9 | None |
| SRR3675524 | Other | lineage4.9;lineage6.3 | None |
| SRR7535086 | Other | None | |
| ERR6866639 | Other | lineage4.9 | None |
| ERR9786611 | HR-TB | lineage4.1.3 | None |
| SRR3675549 | Other | lineage4.9 | None |
| SRR3675581 | Other | lineage2.1;lineage4.9 | None |
| ERR4816559 | MDR-TB | lineage4.4.1.1 | None |
| SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR7496472 | Other | lineage4.9 | None |
| SRR3675221 | Other | lineage4.9 | None |
| ERR4814352 | Other | lineage2.2.1 | None |
| ERR3283019 | Other | lineage2.1;lineage4.9 | None |
| ERR3797069 | Other | lineage4.9 | None |
