Rv0667 - c.1152G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
59 Sensitive
7 RR-TB
29 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 77 |
| lineage2.2.1 | 11 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.1.1.3 | 1 |
| La2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.8 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage6.1.3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 3 |
| La1.8.1 | 1 |
| 2 | |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR926165 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR4799378 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR1063896 | Sensitive | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None |
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