Rv0006 - c.1219C>T


Drug resistance types
37 Sensitive 6 RR-TB 72 HR-TB 14 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 115 Other
lineage Counts
lineage Count
La1.2.BCG 1
lineage4.1.2.1 8
lineage4.9 93
13
lineage4.9;lineage6.3 9
lineage2.2;lineage4 1
lineage2.1;lineage4.9 13
La1.8.1 2
lineage2.1;lineage4.9;lineage6.3 8
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
La3;lineage4.9 6
La2;lineage4.9 2
lineage4.3.2.1 2
lineage6.1.3 2
lineage4.9;lineage9 1
lineage2.2.1;lineage6.3 1
La1.7;lineage3.1;lineage4 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4 3
lineage4.2.1.1 1
lineage5.2 2
lineage1.1.3.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.2.1 4
lineage4.2;lineage4.8.1;lineage4.9 2
lineage3.1.3 1
M.canetti;lineage4.9 3
lineage4.8;lineage4.9 2
lineage4.2;lineage4.9 2
La1.7;lineage4.9 6
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
lineage3.1.2.2 1
lineage3 4
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
lineage2.1 5
La1;lineage4.1.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
La1;lineage4.9 1
lineage4.1.3 2
La3 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.2.2 1
spoligotype Counts
spoligotype Count
None 246
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798262 HR-TB La1.2.BCG None
ERR3804155 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR9787197 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR8692863 Other lineage2.2;lineage4 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR6045010 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR4818929 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR18213713 HR-TB None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502511 Sensitive lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1165628 Other La3;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR3273109 HR-TB lineage4 None
ERR4819877 HR-TB lineage4.9 None
ERR2516379 Sensitive lineage4.2.1.1 be
SRR5341453 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR6046594 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675246 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR3675221 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR4820773 HR-TB lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR926161 Sensitive lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4800341 Other lineage3 None
ERR4817731 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR702406 Other lineage2.1 None
ERR4816656 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR176751 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4407452 Other lineage3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR176778 HR-TB lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR3675572 Other None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR13285068 Sensitive lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR6789626 Other None
ERR926158 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR9117709 Other None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR7496472 Other lineage4.9 None