| lineage | Count |
|---|---|
| lineage4.9 | 81 |
| lineage4.3.2.1 | 2 |
| La1.8.1 | 3 |
| lineage4.6.2.2 | 3 |
| lineage2.2.1 | 13 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage6.1.1 | 2 |
| lineage4.9;lineage9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| 2 | |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La2;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.2 | 2 |
| lineage4.8 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| La1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| spoligotype | Count |
|---|---|
| None | 144 |
| ID | Drug resistance | Lineage | Country iso2 | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR6046878 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR3675270 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR13278785 | MDR-TB | lineage4.6.2.2 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR6045347 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR3675246 | Other | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7240033 | Other | La1.8.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR1063896 | Sensitive | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR6358979 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR1063855 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR926163 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR29096150 | Other | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6044835 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR1791747 | Other | La1.8.1 | None | SRR6046046 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR13266684 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4769450 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR5341303 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR29097026 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None |
|---|