EBG00000313339 - n.3068C>T


Drug resistance types
48 Sensitive 9 RR-TB 61 HR-TB 33 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 35 Other
lineage Counts
lineage Count
lineage4.9 66
lineage3.1.2.2 1
La1;lineage2;lineage4.9 1
lineage2.2.1 8
La3;M.canetti;lineage2.1;lineage4.9 12
lineage1.2.2.2 1
La1.8.1 3
lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
La1;lineage4.9 2
lineage1.1.3.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage3.1.3 1
La3;M.canetti;lineage3.1 1
lineage4.8;lineage4.9 2
lineage4.3.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.4.1.1 1
3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.9 10
La1.7;lineage4.9;lineage6 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
La1.7;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 4
lineage6.1.3 1
lineage4.9;lineage9 2
lineage4.3.2.1 2
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4 1
La2;lineage4.9;lineage9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2.1 1
La1;lineage4.1.2 1
M.canetti;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2.1.1 2
M.canetti;lineage2.1 1
lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La1.7 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
La2;lineage4.9 1
M.canetti;lineage2.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage1.1.2 1
La1.2.BCG 2
lineage1.2.1.2.1 1
La1.7.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3 1
lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 187
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4798923 Sensitive lineage1.2.2.2 in
SRR1791696 Other La1.8.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR5341453 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1173453 Other lineage4.4.1.1 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR970445 MDR-TB lineage2.2.1 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR736872 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1063896 Sensitive None
ERR502511 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR1063883 HR-TB lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR3273109 HR-TB lineage4 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
ERR4797264 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4811493 HR-TB lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR323062 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR137286 Other lineage4.9 None
SRR3675222 Other La1.7 None
SRR1173568 Sensitive lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR323039 HR-TB La2;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675235 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR926160 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR926158 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR3283021 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797193 HR-TB lineage1.1.2 None
ERR779852 Sensitive lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR970413 MDR-TB lineage2.2.1 None
SRR3675585 Sensitive lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
SRR6045892 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR1183965 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR926165 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
SRR7535082 Sensitive lineage4.9 None
SRR18289200 Other lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926157 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797029 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
SRR15316160 Sensitive lineage2.2.1.2 None
ERR6358979 Other lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None