EBG00000313339 - n.1053T>A
Drug resistance types
9 Sensitive
0 RR-TB
32 HR-TB
4 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 46 |
| lineage5.2 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 2 |
| La1;lineage4.9 | 2 |
| La1.7;lineage4.9 | 2 |
| lineage1.1.2 | 2 |
| 1 | |
| lineage4.6.2.2 | 1 |
| lineage2.2.1 | 4 |
| lineage3.1.3 | 1 |
| lineage4 | 1 |
| lineage2.2.1.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7535082 | Other | lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR16156817 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR9787362 | Sensitive | lineage6 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR7236177 | Other | La1.8.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR1063896 | HR-TB | None | ERR9786597 | Other | lineage4.6.2.2 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR1159378 | Other | lineage4.9 | None |
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