EBG00000313339 - n.1945G>C
Drug resistance types
25 Sensitive
3 RR-TB
47 HR-TB
18 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 23 |
| La1 | 1 |
| 43 | |
| lineage4.9 | 16 |
| La1.8.1 | 2 |
| La1.3 | 1 |
| La1.2 | 1 |
| lineage2.2 | 4 |
| lineage2.2.1 | 14 |
| lineage1.1.3.1 | 1 |
| lineage5.2 | 2 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.3.2.1 | 2 |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| lineage4.8 | 5 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1 | 2 |
| lineage3.1.3 | 1 |
| lineage3 | 2 |
| lineage2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 1 |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3273109 | MDR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR4769436 | Other | La1.3 | None | ERR4769452 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR736856 | HR-TB | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR1173185 | HR-TB | lineage4.9 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787336 | Other | lineage6 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR1035138 | MDR-TB | None | SRR5341453 | Sensitive | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | None | SRR5341300 | Other | lineage4 | None | SRR5535933 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046299 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | SRR8217918 | HR-TB | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1035122 | Sensitive | None | DRR188519 | Other | lineage4.4.2 | None | ERR1023525 | HR-TB | lineage4 | None | SRR9971113 | Other | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None |
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