Rv0668 - c.561G>A
Drug resistance types
21 Sensitive
1 RR-TB
30 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 53 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1.7;lineage4.9 | 3 |
| lineage3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2 | 3 |
| lineage2.2.1 | 6 |
| lineage4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.6.2.2 | 3 |
| 2 | |
| La1.8.1 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341453 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR323037 | Other | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR5341467 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR9786597 | Other | lineage4.6.2.2 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR9786843 | Other | None | SRR5341387 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1159378 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
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