EBG00000313339 - n.478G>A
Drug resistance types
98 Sensitive
10 RR-TB
40 HR-TB
13 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| 29 | |
| lineage4 | 51 |
| lineage4.1.2.1 | 4 |
| lineage4.9 | 66 |
| La1.3 | 8 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 25 |
| lineage2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3 | 5 |
| lineage5.2 | 2 |
| lineage6.1.3 | 1 |
| lineage4.8 | 4 |
| lineage6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| La2 | 1 |
| La1.8.1 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 235 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797048 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4024991 | Other | None | ERR4769408 | Other | La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR6358979 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR751326 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9119669 | HR-TB | None | ERR9786076 | Sensitive | lineage3 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9787362 | Sensitive | lineage6 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2100537 | Sensitive | lineage3 | None | SRR21469200 | Other | La1.7.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22048372 | Sensitive | lineage4.8 | None | SRR8692825 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4817069 | RR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4816110 | Sensitive | lineage4.9 | gb | SRR5341384 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR228175 | Sensitive | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR228180 | Sensitive | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR1023509 | Other | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820144 | Sensitive | lineage4.3.2 | None | SRR5341461 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR294266 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323107 | Other | lineage4 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None |
|---|
