EBG00000313339 - n.478G>A


Drug resistance types
98 Sensitive 10 RR-TB 40 HR-TB 13 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 61 Other
lineage Counts
lineage Count
29
lineage4 51
lineage4.1.2.1 4
lineage4.9 66
La1.3 8
La1.2 1
lineage4.9;La1.3 2
lineage1.1.2 2
lineage2.2.1 25
lineage2.2.2 1
lineage1.1.3.1 1
lineage3 5
lineage5.2 2
lineage6.1.3 1
lineage4.8 4
lineage6 1
lineage4.4.1.1.1 2
lineage2.2.1.1 5
lineage4.9;lineage2.2 1
lineage2.2 1
lineage2 1
La2 1
La1.8.1 1
lineage4.2.1 1
La1.7.1 2
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.6.2.2 1
lineage2.1 2
lineage1.2.1.1 1
lineage4.3.4.2.1 2
lineage3.1.3 1
lineage4.3.3 2
lineage4.3.2 1
lineage4.1 1
lineage4.1.2 2
lineage4.3 1
lineage4.3.2.1 1
lineage4.8.1 1
spoligotype Counts
spoligotype Count
None 235
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797048 HR-TB None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283031 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR3283028 Other None
ERR3283047 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR3797087 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR473303 Sensitive lineage4.9 None
ERR4024991 Other None
ERR4769408 Other La1.3 None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769444 HR-TB lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769436 Other La1.3 None
ERR4769506 Sensitive La1.3 None
ERR4769472 Other lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769495 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769555 Other La1.3 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796929 Sensitive lineage4 None
ERR4796254 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797474 Other None
ERR4797264 Sensitive None
ERR4798099 Other None
ERR6358979 Other None
ERR4799378 Sensitive lineage4 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR6358951 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6866022 Other None
ERR6359074 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR751326 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9119669 HR-TB None
ERR9786076 Sensitive lineage3 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR1049675 HR-TB lineage2.2.1 None
ERR9787256 Other lineage6.1.3 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR9787362 Sensitive lineage6 None
SRR1049674 HR-TB lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10808805 Sensitive None
SRR10808668 Sensitive lineage2.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR1140724 HR-TB lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1172717 Other lineage4.9 None
SRR1158918 Sensitive lineage4 None
SRR1172807 Sensitive lineage4.9 None
SRR1173777 Other lineage4 None
SRR1173515 HR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1175513 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180148 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1184024 Other lineage2.2.1.1 None
SRR1181368 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR13888750 Other La2 None
SRR1184308 Sensitive lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR16156188 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR21469201 Other La1.7.1 None
SRR2100532 Sensitive lineage3 None
SRR2100537 Sensitive lineage3 None
SRR21469200 Other La1.7.1 None
SRR21677886 Sensitive lineage4.9 None
SRR22048372 Sensitive lineage4.8 None
SRR8692825 Other lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR8692790 RR-TB lineage4 None
SRR8692893 Other lineage4.9 None
SRR8692905 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR702405 Sensitive lineage2.1 None
ERR4815471 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675246 Sensitive lineage4 None
ERR4817069 RR-TB None
ERR4816964 Other lineage4.9 None
ERR4816110 Sensitive lineage4.9 gb
SRR5341384 Sensitive lineage4.9 None
SRR3675571 HR-TB None
ERR216965 HR-TB lineage4.9 None
ERR216978 Sensitive lineage4.3.4.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR228175 Sensitive lineage3 None
ERR4818710 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR228180 Sensitive lineage3 None
ERR4819357 Other lineage4.9 None
SRR5341366 Sensitive lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341453 Sensitive None
SRR5341387 Other lineage4 None
SRR5341425 Other lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341323 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341310 Other lineage1.1.2 None
ERR1023509 Other None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820144 Sensitive lineage4.3.2 None
SRR5341461 Sensitive lineage4 None
SRR6046141 Other lineage4.9 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4821811 RR-TB lineage4.9 None
SRR5341469 Other lineage4 None
ERR4821655 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6044835 Sensitive lineage4 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044876 Sensitive lineage4 None
ERR2851356 Sensitive lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6511621 HR-TB None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR323037 HR-TB lineage4 None
ERR485006 HR-TB lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6855695 Sensitive lineage4.8 None
SRR6789624 MDR-TB lineage4.1 None
ERR294266 HR-TB None
ERR502510 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
ERR3275941 RR-TB lineage4.3 nl
SRR7535082 Sensitive lineage4 None
SRR9970980 Other lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323107 Other lineage4 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR323066 Sensitive lineage4 None
ERR1063855 Other lineage4 None
ERR323085 Sensitive lineage4 None
ERR1034634 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None