EBG00000313339 - n.478G>A


Drug resistance types
49 Sensitive 12 RR-TB 63 HR-TB 13 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 46 Other
lineage Counts
lineage Count
M.canetti;lineage4.2;lineage4.9 1
lineage4.9 104
lineage2;lineage4.9 1
lineage4.2.1 1
lineage2.2.1.1 4
La1;lineage4.9 3
lineage2.2.1 17
La3;lineage4.9 5
2
La1.7;lineage4.9;lineage6 1
lineage3.1.3 1
lineage4.8;lineage4.9 2
lineage4.4.1.1.1 2
lineage4.1.2.1 3
La1.3 4
lineage4.3.3 3
lineage4.3.2.1 3
lineage6.1.3 1
lineage5.2 2
lineage2.2.1;lineage4 1
lineage1.2.2.2 1
lineage4.1.1.3 3
lineage1.1.2 2
lineage6 1
La1.2 1
lineage2.2.1;lineage4.9 2
lineage4.2;lineage4.8.1;lineage4.9 1
lineage3 1
lineage4.1.2 1
La1.8.1 2
lineage4.3.4.2.1 1
La1;lineage2;lineage4.9 1
lineage4 2
La2 1
La1;lineage4.1.2 1
lineage4.2;lineage4.9 1
lineage4.9.1 1
lineage1.1.3.1 1
lineage4.6.2.2 1
lineage4.3 1
lineage4.8.1 1
lineage4.8 1
spoligotype Counts
spoligotype Count
None 189
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4796254 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR133825 HR-TB La1;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR5341467 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR473323 HR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR1063896 HR-TB None
ERR4817069 RR-TB None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR4769408 Other La1.3 None
ERR3797079 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR216965 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR323066 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR1035122 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR9787362 Sensitive lineage6 None
SRR10808399 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR5341453 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769418 Other La1.2 None
SRR21677886 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1173568 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
SRR1180345 Other lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1180375 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR1159378 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
SRR6045832 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR1063883 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
SRR16156188 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283011 Other La3;lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4769495 Other La1.3 None
SRR1180319 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
SRR1180250 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR736831 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4797184 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR11465189 RR-TB lineage4.9.1 None
ERR502510 HR-TB lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR137286 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR6359070 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR176741 Other lineage4.9 None
ERR3275941 RR-TB lineage4.3 nl
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR1175487 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None