EBG00000313325 - n.1001C>A
Drug resistance types
19 Sensitive
1 RR-TB
32 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 40 |
| lineage4.8 | 5 |
| lineage4.6.4 | 1 |
| lineage4.3.3 | 3 |
| La1.7;lineage4.9 | 3 |
| lineage4.1.2.1 | 2 |
| lineage6 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.6.2.2 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage3 | 1 |
| lineage2.2.1 | 9 |
| lineage4.1.2 | 3 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 2 |
| lineage4.7 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4 | 1 |
| La1.3 | 1 |
| lineage2;lineage4 | 1 |
| 1 | |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 91 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341300 | HR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR1679641 | Other | lineage4.6.4 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR2515460 | Other | lineage4.8 | za | SRR6511621 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR6855915 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR9787362 | Sensitive | lineage6 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR5341467 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | SRR2101681 | Sensitive | lineage4.8 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6982106 | Sensitive | lineage4.8 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | ERR9786597 | Other | lineage4.6.2.2 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7535082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR14782054 | Other | lineage4.9 | None | SRR6855718 | Other | lineage4.8 | None | SRR7236177 | Other | La1.8.1 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | ERR4796254 | Other | lineage4.9 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR137286 | Other | lineage4.9 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR5341453 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR1063896 | HR-TB | None | SRR6982050 | Other | lineage4.3.4.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1791747 | Other | La1.8.1 | None |
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