lineage | Count |
---|---|
La2;lineage4.9 | 1 |
lineage2.2.1 | 3 |
lineage4.9 | 34 |
lineage4.1.1.3 | 1 |
lineage4 | 1 |
La1.7.1;lineage4.9 | 1 |
lineage4.3.4.2 | 2 |
lineage3.1.3 | 1 |
lineage3 | 1 |
La1.8.1 | 3 |
La1.7;lineage4.9;lineage6 | 1 |
lineage2.2 | 1 |
1 | |
lineage4.1.2.1 | 1 |
lineage4.1.2 | 1 |
lineage2.1;lineage4.9 | 2 |
La1.7;lineage4.9 | 6 |
lineage6.1.3 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
La1;lineage4.9 | 1 |
lineage1.1.3.1 | 1 |
lineage4.4.1.2 | 1 |
La3;lineage4.9 | 1 |
lineage4.9;lineage7 | 2 |
M.canetti;lineage4.9;lineage9 | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
M.canetti;lineage1 | 1 |
La1;lineage4.1.2 | 1 |
La2;lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | SRR10808730 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR1063896 | Sensitive | None | SRR6650356 | Sensitive | lineage4.1.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR6358979 | Other | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
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