Rv1630 - c.972C>G
Drug resistance types
78 Sensitive
9 RR-TB
111 HR-TB
37 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
136 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 43 |
| 115 | |
| lineage4.8 | 11 |
| lineage4 | 69 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 30 |
| lineage2.2 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage4.1.2.1 | 11 |
| lineage4.6.1.2 | 5 |
| lineage4.3.4.2.1 | 2 |
| La1.8.1 | 6 |
| lineage3.1.3 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2 | 3 |
| lineage3 | 7 |
| lineage1.1.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.6.2.2 | 7 |
| lineage1.1.2 | 2 |
| lineage4.7 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.5 | 2 |
| lineage2.1 | 4 |
| lineage4.3.3 | 7 |
| lineage2.2.1.1 | 3 |
| lineage4.2.1 | 3 |
| lineage4.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| La1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.1.3 | 2 |
| La1.3 | 4 |
| lineage4.9;La1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.3.4.1;lineage4.3.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1 | 1 |
| lineage6 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1 | 2 |
| lineage2 | 2 |
| lineage4;lineage2.2 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 381 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815752 | Other | lineage4.9 | None | ERR4816999 | Other | None | ERR2229542 | Other | lineage4.8 | None | SRR3675571 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR2027263 | Other | lineage4 | None | SRR3675572 | Other | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816585 | Other | lineage2.2 | None | SRR7496472 | Other | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817735 | Other | lineage4.8 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818615 | Other | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818394 | Other | lineage4.9 | None | SRR5007188 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | ERR3275201 | Sensitive | lineage4.8 | nl | SRR5341461 | Sensitive | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819932 | Other | lineage4.7 | None | ERR2446570 | Sensitive | lineage4.8 | nl | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821276 | Other | lineage3 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044790 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046305 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | SRR6046397 | Other | None | SRR6511621 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | DRR474156 | HR-TB | lineage4.3.3 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6896545 | Other | lineage4.9 | None | SRR6789626 | Other | None | ERR5311099 | HR-TB | None | DRR474153 | HR-TB | lineage4.3.3 | None | ERR294266 | HR-TB | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR7496517 | Other | None | ERR5311081 | HR-TB | None | SRR7496509 | Other | None | ERR5311090 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323043 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR067699 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR137286 | Sensitive | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797069 | Other | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4407452 | Sensitive | lineage3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4811142 | MDR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR5336148 | Other | None | ERR6866022 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR751326 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736867 | HR-TB | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119669 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786443 | Sensitive | lineage4.8 | None | ERR9786445 | Sensitive | lineage4.8 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786508 | Sensitive | lineage4.3.4.1;lineage4.3.3 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9786604 | Other | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786671 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR9787165 | Other | lineage6 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR9787197 | Other | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1172728 | MDR-TB | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR11462861 | Other | La1.8.1 | None | SRR10808805 | Sensitive | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172817 | HR-TB | None | SRR1173118 | Other | None | SRR1172857 | MDR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172951 | Other | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173484 | Other | lineage4 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1175049 | RR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1196566 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR1196768 | MDR-TB | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR13837691 | Sensitive | lineage4.9 | None | SRR14520038 | HR-TB | lineage4.3.3 | None | SRR14801749 | Sensitive | None | SRR15368973 | Other | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR12142341 | HR-TB | None | SRR13837788 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18911450 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303884 | HR-TB | None | SRR8692807 | Other | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692893 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR8692887 | Other | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | ERR4815604 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675465 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176779 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675236 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675311 | Other | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None |
|---|
