EBG00000313339 - n.972G>A
Drug resistance types
23 Sensitive
5 RR-TB
61 HR-TB
16 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9 | 88 |
| La1.7;lineage4.9 | 6 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1 | 10 |
| La1.2.BCG | 1 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage3 | 1 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.1 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.8.1 | 3 |
| lineage2.2.1.1 | 1 |
| La1;lineage4.9 | 2 |
| lineage4 | 1 |
| lineage4.9;lineage7 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| 1 | |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage5.2 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage1.1.2 | 3 |
| lineage6 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.2.2 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 157 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR867569 | Other | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR926160 | Other | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR5341298 | Other | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR926165 | Other | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR926157 | Other | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR3675582 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR1791911 | Other | La1.8.1 | None | ERR926163 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR9787362 | Sensitive | lineage6 | None | SRR5341453 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR9786597 | Other | lineage4.6.2.2 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR3797029 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR5341308 | HR-TB | lineage4.9 | None |
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