Rv0668 - c.2583G>C


Drug resistance types
81 Sensitive 8 RR-TB 40 HR-TB 18 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 66 Other
lineage Counts
lineage Count
lineage4.9 116
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.2.1 20
La3;lineage4.9 9
M.canetti;lineage4.2 1
lineage4.8;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 2
lineage4.3.4.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.8 3
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4 4
lineage1.1.3.1 1
lineage2.2.1.1 5
La1.2.BCG 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.9 3
lineage3 4
lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.7 1
La1.7;lineage4.9;lineage6 1
2
lineage4.1.2 1
lineage4.6.3;lineage4.9 1
lineage4.9;lineage7 3
lineage4.2.1.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.2.BCG;lineage4.9 1
lineage4.2.1 1
lineage1.1.2 1
La1;lineage4.1.2 1
lineage4.2;lineage4.8.1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.4.1.1.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.8.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage1.2.1.1 1
La3;lineage4.3.4 1
lineage4.3.2.1 1
La1;lineage4.9 1
La1.7;lineage4.9 1
spoligotype Counts
spoligotype Count
None 218
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12416842 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR1180172 Other lineage2.2.1 None
SRR5341308 Sensitive lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR6832249 Sensitive lineage2.2.1 None
SRR6044835 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR10315551 Sensitive lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR5341299 HR-TB lineage4.9 None
SRR1180270 Other lineage2.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR13285192 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
ERR387051 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR6358979 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR702405 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR4798099 Other lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR212123 Other lineage4.9 None
SRR5341366 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR161037 Other lineage4.9 None
ERR4819933 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4596910 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR9971112 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4815815 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR6359070 Sensitive lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR4769442 Sensitive lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR4796254 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR7645928 Other lineage4.7 None
ERR4816762 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR6044875 Sensitive lineage4.9 None
ERR1063896 Sensitive None
ERR502511 Sensitive lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR13285068 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR067712 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR3675235 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR8692887 Other None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11662694 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4799378 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR779852 Sensitive lineage4.9 None
ERR323085 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
ERR736831 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6046382 Sensitive lineage2.2.1 None
SRR6046385 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR6045010 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR473323 HR-TB lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1159378 Other lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR176741 Other lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR10315567 HR-TB lineage2.2.1 None
ERR6359069 Sensitive lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR926159 Sensitive lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None