Rv0668 - c.2583G>C
Drug resistance types
83 Sensitive
6 RR-TB
62 HR-TB
14 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
77 Other
lineage Counts
| lineage | Count |
|---|---|
| 53 | |
| lineage4 | 64 |
| lineage5.1.1 | 1 |
| lineage2.2.1 | 26 |
| lineage4.1.2 | 2 |
| lineage4.8 | 4 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 3 |
| lineage3 | 5 |
| lineage4.9 | 58 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3.4 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 247 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502889 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063855 | Other | lineage4 | None | ERR1063896 | Sensitive | None | ERR133986 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797064 | Sensitive | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769472 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4798406 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6358979 | Other | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866639 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692905 | HR-TB | None | SRR8692800 | Other | lineage4 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | ERR181744 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675456 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675550 | Other | None | ERR4816964 | Other | lineage4.9 | None | SRR3675571 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR4816470 | Other | lineage3 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR1035162 | Other | None | ERR4819051 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5341453 | Sensitive | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341222 | Sensitive | lineage3.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR1023509 | Other | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820833 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046210 | Other | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832249 | Other | lineage2.2.1 | None |
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