SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR26937107
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832249
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR10315551
|
Sensitive
|
lineage2.2.1
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
SRR1180270
|
Other
|
lineage2.2.1
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
ERR13285192
|
Sensitive
|
lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SAMN02585910
|
Other
|
lineage2.2.1
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
ERR212123
|
Other
|
lineage4.9
|
None
|
SRR5341366
|
Sensitive
|
lineage4.9
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
ERR4819933
|
Sensitive
|
lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR1181328
|
Other
|
lineage2.2.1
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
SRR1184024
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR1183145
|
Other
|
lineage2.2.1
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
SRR28351339
|
MDR-TB
|
lineage4
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR3797079
|
Sensitive
|
lineage4.9
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
ERR3439432
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
SRR7645928
|
Other
|
lineage4.7
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
ERR13285068
|
Sensitive
|
lineage4.9
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR6832178
|
HR-TB
|
lineage4.2.1.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
SRR3675446
|
RR-TB
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR8692887
|
Other
|
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR6044876
|
Sensitive
|
lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR1915481
|
Other
|
La1.2.BCG;lineage4.9
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
SRR5341303
|
Sensitive
|
lineage4.9
|
None
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4799378
|
Sensitive
|
lineage4.9
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
SRR9970979
|
Sensitive
|
lineage4.8
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
SRR5341465
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971113
|
Other
|
lineage2.2.1
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR323085
|
Sensitive
|
lineage4.9
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR1173568
|
Sensitive
|
lineage4.9
|
None
|
ERR4818710
|
Sensitive
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
ERR176741
|
Other
|
lineage4.9
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR13285191
|
Sensitive
|
lineage4.9
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|