lineage | Count |
---|---|
lineage4.8 | 8 |
lineage2.1 | 2 |
lineage4 | 39 |
12 | |
lineage4.1.2.1 | 4 |
lineage3 | 4 |
lineage4.9 | 40 |
lineage4.8.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.1.1.3.1 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1 | 11 |
lineage1.1.2 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage4.3.3 | 2 |
lineage2.2.1.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.8.1 | 1 |
lineage2.2.2 | 2 |
La1.7.X-unk4 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2 | 1 |
lineage2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.2.1 | 1 |
La1.8.1 | 1 |
spoligotype | Count |
---|---|
None | 145 |
ID | Drug resistance | Lineage | Country iso2 | SAMEA3501073 | RR-TB | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4816756 | RR-TB | None | ERR4817127 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR4816470 | Other | lineage3 | None | ERR2229233 | Sensitive | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228890 | Other | lineage4 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341375 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5341396 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821057 | HR-TB | lineage4 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR502510 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR019855 | Other | lineage3 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR323066 | Sensitive | lineage4 | None | ERR017781 | Other | lineage3 | None | ERR1063896 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4024991 | Other | None | ERR4596910 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6866022 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173139 | Sensitive | lineage4.9 | None | ERR751326 | Sensitive | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR13591342 | HR-TB | lineage4.1.1.3 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR1791747 | Other | La1.8.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None |
---|