Rv0667 - c.1167G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
79 Sensitive
11 RR-TB
58 HR-TB
25 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 117 |
| La3;lineage4.9 | 7 |
| lineage4.3.3 | 2 |
| M.canetti;lineage2.2 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.2.1 | 17 |
| lineage4.3.2.1 | 3 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 5 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.1.1.3 | 5 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.6.2.2 | 6 |
| La2;lineage4.9 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage4.1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| lineage6.1.3 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1;lineage4.9 | 3 |
| La1.8.1 | 2 |
| lineage4.1.2 | 2 |
| La1.2 | 1 |
| 6 | |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage3 | 4 |
| lineage4.6.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4 | 4 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage4.8;lineage4.9 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.4 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.8.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 250 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323048 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR12015084 | Other | lineage4.8 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR550637 | MDR-TB | lineage4.1.1.3 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR176741 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR13278785 | MDR-TB | lineage4.6.2.2 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR16156817 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR11662694 | Other | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR7240033 | Other | La1.8.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR29097026 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR23961549 | Other | La1.2 | None | SRR29097037 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | ERR3797029 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR11252736 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR2199988 | MDR-TB | lineage4.1.1.3 | None | SRR1238559 | Other | lineage4.9 | None | ERR4798823 | HR-TB | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786526 | Other | lineage4.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR473332 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR6358979 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR9786525 | Other | lineage4 | None | SRR12006550 | Sensitive | None | ERR176779 | HR-TB | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR17832802 | HR-TB | lineage3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR7535086 | Other | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR29096150 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None |
|---|
