EBG00000313325 - n.178G>T
Drug resistance types
68 Sensitive
4 RR-TB
28 HR-TB
14 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 79 |
| lineage4.2.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| La3;lineage4.9 | 8 |
| lineage6 | 1 |
| lineage2.2.1 | 15 |
| lineage3.1.3 | 1 |
| lineage3 | 3 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage4 | 3 |
| La3;lineage4 | 1 |
| lineage4.8 | 5 |
| lineage4.1.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.8.1 | 3 |
| lineage4.3.3 | 1 |
| 1 | |
| La1.3 | 3 |
| lineage6.1.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.1 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 149 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172885 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR5341387 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR1159378 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5341300 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR22249400 | Sensitive | lineage1.2.2.2 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR1063896 | Sensitive | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4769408 | Other | La1.3 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR867566 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR5341303 | Sensitive | lineage4.9 | None |
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