lineage | Count |
---|---|
lineage4.9 | 11 |
lineage4 | 77 |
lineage4.3.4.1 | 1 |
La1.8.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.1.1 | 1 |
24 | |
lineage4.1;lineage1 | 1 |
lineage4.1.2.1 | 3 |
lineage4.1.1.2 | 1 |
lineage3 | 3 |
lineage4.6.2.2 | 1 |
lineage2.2.1 | 9 |
lineage4.3.2.1 | 2 |
lineage4.2.1 | 1 |
lineage1.1.2 | 2 |
lineage4.7 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1.2 | 2 |
lineage4.8 | 1 |
lineage5.1.2 | 1 |
lineage4.3.4.2 | 1 |
lineage6.1.3 | 1 |
spoligotype | Count |
---|---|
None | 148 |
ID | Drug resistance | Lineage | Country iso2 | SRR1173568 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1791747 | Other | La1.8.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR5341387 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341425 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341455 | Sensitive | lineage4 | None | ERR2514125 | Other | lineage3 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341319 | Other | lineage3 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046460 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046362 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323107 | Other | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1035122 | Sensitive | None | ERR067699 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283028 | Other | None | ERR323115 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR6358979 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736831 | HR-TB | lineage4.9 | None | ERR702404 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None |
---|