Rv3596c - c.1518G>T


Drug resistance types
79 Sensitive 2 RR-TB 43 HR-TB 9 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 44 Other
lineage Counts
lineage Count
lineage4.9 115
lineage4.8;lineage4.9 2
lineage2.2.1.1 1
lineage2.2.1;lineage4 2
La1.8.1 4
M.canetti;lineage2.2 2
lineage2.2.1 8
La1.7;M.canetti;lineage4.9 2
lineage4 5
lineage4.1.2.1 3
La1.7;lineage4.9;lineage6 1
lineage3 6
lineage4.4.1.1.1 1
lineage2;lineage4.9 1
lineage4.3.4.2 1
lineage4.3.3 2
lineage4.8 2
lineage1.1.2 1
La1.7;lineage4.9 4
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.3.2.1 1
La1;lineage4.9 1
lineage2.2.1;lineage4.9 2
lineage3.1.3 1
2
lineage4.1.2 1
La1.7 1
lineage6.1.3 1
La1;lineage2;lineage4.9 1
lineage4.3.4.2.1 1
M.canetti;lineage4.9 2
lineage3.1 1
lineage4.7 1
lineage4.6.2.2 1
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 183
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21677886 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1238558 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR6359070 Sensitive lineage4.9 None
SRR28351342 HR-TB lineage2.2.1;lineage4 None
SRR5341387 Other lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6045795 Sensitive lineage2.2.1 None
SRR1175513 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1158918 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4769444 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR28351347 Other lineage3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180375 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR5153091 HR-TB lineage4.3.3 None
SRR6044780 Sensitive lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR5341310 Other lineage1.1.2 None
ERR176741 Other lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4797184 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR6359069 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180355 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
ERR4796254 Sensitive lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
ERR4796577 HR-TB None
SRR1175052 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4830353 Other La1.7 None
SRR5341425 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR736856 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR1180420 Sensitive lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR22424787 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6359074 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR6358951 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR3675441 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
ERR736834 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR4819462 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR7496523 Other lineage4.7 None
SRR6046141 Other lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180410 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR7236177 Other La1.8.1 None
SRR6045832 Other lineage4.9 None
ERR4819314 Other lineage1.1.1 None
SRR1181325 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1180345 Other lineage4.9 None
ERR1063896 Sensitive None
SRR1180300 Sensitive lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1791747 Other La1.8.1 None
SRR3675492 Other La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR3275709 HR-TB lineage3 nl
SRR1184021 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR4814639 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4596910 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None