Rv3457c - c.105C>T


Drug resistance types
15 Sensitive 4 RR-TB 16 HR-TB 10 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 29 Other
lineage Counts
lineage Count
lineage4.9 29
lineage1.1.3.1 1
La1;lineage4.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1;lineage4 1
lineage4 1
lineage2.1;lineage4.9 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage3 1
lineage4.9;lineage7 3
lineage2.2.1.1 1
lineage2.2.1 4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.9 2
lineage4.2.1.1;lineage4.3.3 1
1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.1.2 1
La1.8.1 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage4.2 1
La1.7;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 74
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341453 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR3675585 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4796929 Sensitive lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046878 Other lineage4.9 None
ERR387051 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6045053 Other lineage4 None
SRR3675284 Sensitive lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR13285068 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR25827373 Other lineage3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR4769452 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR29097066 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046382 Sensitive lineage2.2.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1063896 Sensitive None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341308 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None