lineage | Count |
---|---|
lineage4.9 | 84 |
lineage4.8;lineage4.9 | 2 |
lineage4 | 2 |
lineage1.1.1 | 1 |
lineage2.2.1 | 10 |
1 | |
lineage4.1.2.1 | 2 |
lineage4.3.4.2.1 | 2 |
La1;lineage4.9 | 2 |
La1.7;lineage4.9 | 3 |
lineage3 | 2 |
lineage4.6.2.2 | 1 |
lineage1.1.2 | 2 |
lineage4.3 | 1 |
lineage6.1.3 | 1 |
lineage4.8 | 1 |
lineage4.1.1.2 | 1 |
lineage4.2.1 | 1 |
La1;lineage4.1.2 | 1 |
lineage2.2.1.1 | 1 |
La1.8.1 | 1 |
La1.7;lineage4.9;lineage6 | 1 |
lineage2.2 | 1 |
lineage4.3.3 | 1 |
lineage4.1.2 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
La1;lineage2;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 130 |
ID | Drug resistance | Lineage | Country iso2 | SRR6045892 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341387 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6044835 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR7236177 | Other | La1.8.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None |
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