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SRA data
Rv0006
- c.427_429delAGGinsCGC
Drug resistance types
38 Sensitive
3 RR-TB
94 HR-TB
10 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
89 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
76
M.canetti;lineage2.1;lineage4.9
12
lineage2.2.1
11
La3;M.canetti;lineage2.1;lineage4.9
9
lineage4.1.2.1
7
lineage2.1;lineage4.9
5
5
M.canetti;lineage2.1;lineage4.9;lineage6.3
4
La1.7;M.canetti;lineage4.9
4
La1.7;lineage4.9
3
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
238
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR067699
Sensitive
La1;lineage2;lineage4.9
None
ERR1034634
HR-TB
lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035122
Sensitive
lineage4.9
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR1063858
HR-TB
lineage4.9
None
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