Rv0006 - c.427_429delAGGinsCGC


Drug resistance types
32 Sensitive 3 RR-TB 94 HR-TB 10 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 83 Other
lineage Counts
lineage Count
lineage3 3
La1;lineage2;lineage4.9 1
lineage4.9 66
lineage4.9;lineage9 1
La1.8.1 3
lineage4.3.4.2.1 3
lineage2.1;lineage4.9 5
M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.1.3.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 2
La1.2.BCG 1
M.canetti;lineage2.1 1
La1.7;M.canetti;lineage4.9 4
lineage2.1;lineage4.1.1.1;lineage6.3 1
La1.7.1 1
5
La3;lineage4.9 2
lineage2.2.1 8
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.2.1 7
M.canetti;lineage4.9 2
lineage1;lineage4.9 1
lineage1.1.2;lineage4 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.4.1 1
La1.7.1;lineage4.9 1
lineage4.4.1.2 1
lineage3.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.4.1.1 2
lineage4.6.2.2 2
lineage4.9;lineage6.3 3
lineage4.8;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage2.1;lineage4.9 9
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.2;lineage4.9 2
lineage4.9;lineage7 1
lineage4.3.2;lineage4.9 1
lineage4.1;lineage4.8 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.2 3
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.3 1
M.canetti;lineage4.9;lineage9 1
lineage2.1;lineage4.3.2 1
La1.7;lineage4.9 3
lineage4.6.3;lineage4.9 2
La2;lineage4.9 1
lineage1.1.2 1
La1.7 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1;lineage4.9 1
lineage2.1 1
La3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage1.2.1.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.6.1.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 225
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4797588 MDR-TB lineage3 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR161037 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR1791696 Other La1.8.1 None
SRR6044942 HR-TB lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR13285191 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR28868888 Other lineage1.1.3.2 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR13861305 Other lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
ERR4798262 HR-TB La1.2.BCG None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR10808730 Other lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR9786604 Other None
SRR3675243 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4796254 Sensitive lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR13861224 Sensitive lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR6046046 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR176751 Other lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1183111 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3675585 Sensitive lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR13265833 Other lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2509673 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR1162864 Other lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13285192 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR7236177 Other La1.8.1 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR29096795 Sensitive lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR9786682 Other lineage4.1.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR702405 Sensitive lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR502510 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR990545 Other lineage3 None
SRR23961542 Other La1;lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR1172817 Other La3 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341308 Sensitive lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR5311094 HR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR26331611 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6044815 Other lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1173453 Other lineage4.4.1.1 None
SRR6044838 Other lineage4.9 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046878 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323062 Sensitive lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4798823 HR-TB lineage4 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR3797080 Sensitive lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR1167055 Other lineage4.1.2.1 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR2446566 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR29096879 Sensitive lineage4.9 None