Rv0407 - c.813C>T
Drug resistance types
22 Sensitive
2 RR-TB
34 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 52 |
| lineage1.1.3.1 | 1 |
| 1 | |
| lineage5.1.4 | 21 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1 | 4 |
| La3;lineage4.9 | 4 |
| lineage1.1.2 | 1 |
| lineage4 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR926164 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | ERR3170441 | Sensitive | lineage5.1.4 | gh | ERR3170421 | Sensitive | lineage5.1.4 | gh | ERR3170428 | Sensitive | lineage5.1.4 | gh | ERR137286 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR702408 | MDR-TB | lineage5.1.4 | gh | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR502536 | MDR-TB | lineage5.1.4 | gh | ERR926162 | Sensitive | lineage4.9 | None | ERR751314 | MDR-TB | lineage5.1.4 | gh | SRR1183965 | Sensitive | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR1203077 | Sensitive | lineage5.1.4 | gh | ERR926158 | Sensitive | lineage4.9 | None | ERR552506 | Sensitive | lineage5.1.4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR234145 | Sensitive | lineage5.1.4 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR751295 | Sensitive | lineage5.1.4 | gh | ERR552507 | Sensitive | lineage5.1.4 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR1203076 | Sensitive | lineage5.1.4 | gh | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR702415 | Other | lineage5.1.4 | gh | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR439948 | Sensitive | lineage5.1.4 | None | ERR3797029 | Other | lineage4.9 | None | ERR1203069 | Sensitive | lineage5.1.4 | gh | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR21659827 | Sensitive | lineage5.1.4 | None | ERR926165 | Other | lineage4.9 | None | ERR502513 | Sensitive | lineage5.1.4 | gh | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR926156 | Other | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR552589 | Other | lineage5.1.4 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR751348 | Sensitive | lineage5.1.4 | gh | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR552590 | Other | lineage5.1.4 | cg | ERR926159 | Sensitive | lineage4.9 | None | ERR552588 | Other | lineage5.1.4 | None | ERR4796254 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None |
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