Rv0407 - c.813C>T
Drug resistance types
50 Sensitive
2 RR-TB
14 HR-TB
12 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 35 |
| lineage1.1.2 | 1 |
| lineage2.2.1 | 7 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.5 | 1 |
| lineage2.1 | 2 |
| 21 | |
| lineage5 | 1 |
| lineage5.1.4 | 19 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 1 |
| La1.8.1 | 3 |
| lineage2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.9 | 3 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 104 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341308 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5451699 | Other | lineage4.5 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR6045892 | Sensitive | None | SRR6045217 | Other | lineage4 | None | SRR6511621 | HR-TB | None | ERR3170421 | Sensitive | lineage5 | gh | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR502536 | MDR-TB | lineage5.1.4 | gh | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6785457 | Sensitive | lineage4.2.1 | None | ERR3170441 | Sensitive | lineage5.1.4 | gh | ERR502513 | Sensitive | lineage5.1.4 | gh | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR3170428 | Sensitive | lineage5.1.4 | gh | ERR502510 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1035122 | Sensitive | None | ERR323085 | Sensitive | lineage4 | None | ERR1203069 | Sensitive | lineage5.1.4 | gh | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR1203076 | Sensitive | lineage5.1.4 | gh | ERR1203077 | Sensitive | lineage5.1.4 | gh | ERR3797060 | Other | La1.8.1 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR4024991 | Other | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4627365 | Other | La1.8.1 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR736848 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866410 | Sensitive | None | ERR702415 | Other | lineage5.1.4 | gh | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR702408 | MDR-TB | lineage5.1.4 | gh | ERR736834 | Sensitive | lineage4 | None | ERR751314 | MDR-TB | lineage5.1.4 | gh | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751295 | Sensitive | lineage5.1.4 | gh | SRR10315567 | Other | lineage2.2.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR751348 | Sensitive | lineage5.1.4 | gh | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR21659827 | Sensitive | lineage5.1.4 | None | ERR552507 | Sensitive | lineage5.1.4 | None | ERR552588 | Other | lineage5.1.4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR552506 | Sensitive | lineage5.1.4 | None | ERR234145 | Sensitive | lineage5.1.4 | None | ERR552590 | Other | lineage5.1.4 | cg | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR552589 | Other | lineage5.1.4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None |
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