Rv0006 - c.291G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
80 Sensitive
3 RR-TB
45 HR-TB
7 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 109 |
| La3;lineage4.9 | 12 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 8 |
| M.canetti;lineage1 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 2 |
| La1.8.1 | 2 |
| lineage4.9;lineage7 | 1 |
| La1.6 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1.7;lineage4.9 | 3 |
| lineage4 | 2 |
| lineage4.1.2.1 | 5 |
| lineage3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| 2 | |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.8 | 3 |
| lineage4.5 | 1 |
| lineage6 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.2 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2.1.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 189 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2446566 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR11465234 | Sensitive | lineage4.1.2.1;lineage4.3.4.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR29096530 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR29096107 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7240033 | Other | La1.8.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR29097054 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR11268038 | Other | La1.6 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR212033 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR1063896 | Sensitive | None | ERR473323 | HR-TB | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR29096710 | Sensitive | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR29096879 | Sensitive | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR8692887 | Other | None | SRR29231298 | Sensitive | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR29096394 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9787030 | Sensitive | lineage6 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR29096659 | Sensitive | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR176751 | Other | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4822454 | Sensitive | lineage4.1.2.1 | de | ERR4822622 | Sensitive | lineage4.1.2.1 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR29096882 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046210 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None |
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