Rv0006 - c.291G>C
Drug resistance types
67 Sensitive
2 RR-TB
65 HR-TB
6 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| 53 | |
| lineage4.9 | 19 |
| lineage4 | 61 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 2 |
| lineage4.3 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 9 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1.1 | 1 |
| La1.6 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.8 | 3 |
| lineage4.3.4.2.1;lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2 | 2 |
| La1 | 1 |
| La1.8.1 | 3 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| La3 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 186 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8692887 | Other | None | SRR8692893 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR181887 | HR-TB | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6045519 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046492 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | ERR4822454 | Sensitive | lineage4.1.2.1 | de | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4822622 | Sensitive | lineage4.1.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6511621 | HR-TB | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR11268038 | Other | La1.6 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR323045 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR11465234 | Sensitive | lineage4.3.4.2.1;lineage4.1.2.1 | None | ERR1035122 | Sensitive | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR1034634 | HR-TB | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1063862 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR1063858 | HR-TB | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283028 | Other | None | ERR3797015 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR3797064 | Sensitive | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR4769442 | HR-TB | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358979 | Other | None | ERR4811493 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR9634265 | Sensitive | None | ERR9119669 | HR-TB | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1169249 | Other | La3 | None | SRR1180996 | HR-TB | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR14801749 | Sensitive | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None |
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