lineage | Count |
---|---|
lineage2.2.1 | 11 |
lineage2.1 | 2 |
lineage4.1 | 2 |
lineage2.2.1.1 | 4 |
57 | |
lineage4 | 75 |
lineage4.1.2 | 2 |
La2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.8 | 1 |
lineage4.3.3 | 1 |
lineage2.2 | 1 |
lineage4.3.4.1;La1.7 | 1 |
lineage4.9 | 17 |
lineage6.1.1 | 2 |
La1.2 | 1 |
lineage3 | 2 |
lineage3.1.2 | 1 |
lineage4.6.1.1 | 1 |
lineage4.5 | 1 |
lineage6.1.3 | 1 |
lineage1.1.3.1 | 1 |
lineage4.1.2.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.2.1 | 1 |
La1.8.1 | 1 |
lineage1.2.1.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.1.1.2 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 195 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7535086 | Other | None | ERR294266 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR502524 | HR-TB | La2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323053 | HR-TB | None | ERR1034652 | Other | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1035122 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR3797048 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6866022 | Other | None | ERR4811030 | Sensitive | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359045 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR14801749 | Sensitive | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR17658565 | Other | lineage3 | None | SRR1791747 | Other | La1.8.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR8692887 | Other | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675501 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR176651 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR212034 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675550 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR6045555 | HR-TB | None | SRR5535933 | HR-TB | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045519 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6046133 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | ERR4830536 | MDR-TB | lineage4.1.1.3 | None | ERR4830353 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None |
---|