Rv0667 - c.942C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
56 Sensitive
5 RR-TB
26 HR-TB
17 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 7 |
| lineage4.9 | 75 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.8;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| 3 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.7 | 2 |
| lineage1.2.1.1 | 1 |
| lineage6.1.1 | 2 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3 | 2 |
| lineage2.2.1 | 11 |
| La1.6;lineage4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.6.1 | 1 |
| La1;lineage4.9 | 2 |
| lineage4 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.1.2 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La2;lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR4798099 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR29096394 | Sensitive | lineage4.9 | None | SRR29049025 | Sensitive | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR26159066 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675222 | Other | La1.7 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR29096882 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR29096709 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR7535086 | Other | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR29096710 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR29096530 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None |
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