EBG00000313339 - n.1404C>A
Drug resistance types
48 Sensitive
1 RR-TB
18 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 2 |
| lineage4.9 | 54 |
| lineage1.1.2 | 1 |
| lineage4.8 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.8.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 8 |
| lineage1.1.3.1 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| 1 | |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| La1;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage3.1.1 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR1173777 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR3797007 | Other | La1.8.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | SRR6789621 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | lineage4.9 | None | DRR034489 | Other | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None |
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