EBG00000313339 - n.1404C>A


Drug resistance types
16 Sensitive 1 RR-TB 37 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 27 Other
lineage Counts
lineage Count
lineage4.9 50
lineage2.2.1 7
lineage3.1.1 1
lineage4.1.1.3 1
La1;lineage2;lineage4.9 1
lineage1.1.3.1 2
La1;lineage4.9 2
lineage4.1.2.1 3
La1.7;lineage4.9;lineage6 1
La1.7;lineage4.9 2
lineage4.3.4.2.1 1
lineage6.1.3 1
lineage4 1
lineage1.1.2 1
lineage6 1
La1.8.1 2
lineage4.2;lineage4.6.3;lineage4.9 1
La1;lineage4.1.2 1
lineage4.6.2.2 1
lineage2.2.1.1 2
M.canetti;lineage4.9 1
La1.7 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.1.2 1
1
spoligotype Counts
spoligotype Count
None 87
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR2693252 HR-TB lineage4.9 None
ERR1063890 Sensitive lineage3.1.1 None
ERR4769433 RR-TB lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR4769482 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR1183965 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR323066 HR-TB lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR12416842 HR-TB lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR736834 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR12420396 Sensitive lineage2.2.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR779852 HR-TB lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
DRR034489 Other lineage2.2.1 None
SRR1159378 Other lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR5341384 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR323068 Sensitive lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR9787362 Sensitive lineage6 None
SRR10809074 HR-TB lineage4.9 None
ERR3797007 Other La1.8.1 None
ERR133825 HR-TB La1;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4797184 HR-TB lineage4.9 None
SRR1181319 Sensitive lineage2.2.1 None
ERR3324325 MDR-TB lineage4.6.2.2 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR137286 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR7535082 Other lineage4.9 None
ERR124636 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR10808490 Sensitive lineage2.2.1.1 None
ERR323107 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
SRR1158918 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341299 HR-TB lineage4.9 None
ERR163988 Sensitive lineage4.1.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR1063896 HR-TB None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None