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SRA data
Rv0006
- c.1302A>C
Drug resistance types
52 Sensitive
6 RR-TB
51 HR-TB
20 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
88
lineage2.2.1
10
M.canetti;lineage4.9
4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
La1.7;lineage4.9
4
lineage4
3
La1.7;M.canetti;lineage4.9
3
lineage4.9;lineage7
3
lineage4.8;lineage4.9
2
lineage4.1.1.3;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
187
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034634
HR-TB
lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035122
Sensitive
lineage4.9
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR1063883
HR-TB
lineage4.9
None
ERR1063896
Sensitive
None
ERR108125
RR-TB
lineage4.9
None
Showing 1 to 10 of 187 entries
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